RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 ZNF407Q9C0G0 2248 aa12.43□□□□□ -0.42
SRRT-206ENST00000460194 EML6Q6ZMW3 1958 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 NPIPA5E9PKD4 350 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 SGK494L7N484 410 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 AP3B1O00203 1094 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 KIF5CO60282 957 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 DNAJB6O75190 326 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 AVILO75366 819 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 SP1P08047 785 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 MPC1LP0DKB6 136 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 IL1RNP18510 177 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 TPSB2P20231 275 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 MAGEA6P43360 314 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 AGTR2P50052 363 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 CSNK1G2P78368 415 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 CDK16Q00536 496 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 TIAL1Q01085 375 aaKnown RBP eCLIP12.42□□□□□ -0.42
SRRT-206ENST00000460194 ALDH6A1Q02252 535 aaKnown RBP12.42□□□□□ -0.42
SRRT-206ENST00000460194 CUL1Q13616 776 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 TPSAB1Q15661 275 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 EXT1Q16394 746 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 KRTAP21-3Q3LHN1 58 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 MINDY4Q4G0A6 757 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 ARMC3Q5W041 872 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 GALNTL5Q7Z4T8 443 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 LGI4Q8N135 537 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 ARMC10Q8N2F6 343 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 AFAP1L2Q8N4X5 818 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 CCDC89Q8N998 374 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 CD200R1Q8TD46 325 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 EBNA1BP2Q99848 306 aaKnown RBP12.42□□□□□ -0.42
SRRT-206ENST00000460194 BAG1Q99933 345 aaPredicted RBP12.42□□□□□ -0.42
SRRT-206ENST00000460194 UTP23Q9BRU9 249 aaKnown RBP12.42□□□□□ -0.42
SRRT-206ENST00000460194 KCNK13Q9HB14 408 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 KLHL1Q9NR64 748 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 INTS10Q9NVR2 710 aaKnown RBP12.42□□□□□ -0.42
SRRT-206ENST00000460194 HCN3Q9P1Z3 774 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 ITGB1BP2Q9UKP3 347 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 NPIPA1Q9UND3 350 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 DHRS7Q9Y394 339 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 DNAJC13O75165 2243 aa12.42□□□□□ -0.42
SRRT-206ENST00000460194 ZCWPW2A0A1B0GU75 182 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 ZNF839A8K0R7 811 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 GABRR3A8MPY1 467 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 MAGEB17A8MXT2 336 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 E9PLN8 166 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 CDK2AP1O14519 115 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 ESRRAP11474 423 aaPredicted RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 HRH2P25021 359 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 EEF1DP29692 281 aaKnown RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 COILP38432 576 aaPredicted RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 CASP6P55212 293 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 SLC26A5P58743 744 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 RPS15AP62244 130 aaKnown RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 BASP1P80723 227 aaKnown RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 HSF1Q00613 529 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 TSTA3Q13630 321 aaPredicted RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 USP10Q14694 798 aaKnown RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 SFT2D3Q587I9 215 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 SEL1L2Q5TEA6 688 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 MEI1Q5TIA1 1274 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 SLC25A25Q6KCM7 469 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 NEPROQ6NW34 567 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 PAPD4Q6PIY7 484 aaKnown RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 C4orf22Q6V702 233 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 CAND1Q86VP6 1230 aaKnown RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
SRRT-206ENST00000460194 MARVELD2Q8N4S9 558 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 AGAP11Q8TF27 550 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 KCNJ9Q92806 393 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 TSLPQ969D9 159 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 THAP11Q96EK4 314 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 MAGED4Q96JG8 741 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 VKORC1Q9BQB6 163 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 SARGQ9BW04 601 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 MCCC2Q9HCC0 563 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 C19orf25Q9UFG5 118 aaPredicted RBP12.41□□□□□ -0.42
SRRT-206ENST00000460194 SLC22A7Q9Y694 548 aa12.41□□□□□ -0.42
SRRT-206ENST00000460194 MAP1AP78559 2803 aaPredicted RBP12.4□□□□□ -0.42
SRRT-206ENST00000460194 FAM227AF5H4B4 570 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 NME2P1O60361 137 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 RDH16O75452 317 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 UQCRHP07919 91 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 NME2P22392 152 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 KCNJ1P48048 391 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 TBPL1P62380 186 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 ADCK2Q7Z695 626 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 SLC26A11Q86WA9 606 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 DENND6AQ8IWF6 608 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 TMEM178AQ8NBL3 297 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 OR5T3Q8NGG3 340 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 OR1F2PQ96R84 312 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 OLFM1Q99784 485 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 GPAMQ9HCL2 828 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 ADAMTS6Q9UKP5 1117 aa12.4□□□□□ -0.42
SRRT-206ENST00000460194 NIPBLQ6KC79 2804 aaeCLIP12.4□□□□□ -0.42
SRRT-206ENST00000460194 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.39□□□□□ -0.43
SRRT-206ENST00000460194 FAM237BA0A1B0GVD1 139 aa12.39□□□□□ -0.43
SRRT-206ENST00000460194 FEZF1A0PJY2 475 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms