RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 A0A1W2PQF6 199 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 GSAPA4D1B5 854 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 MAGEA13PA6NCF6 341 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 GABRG2P18507 467 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 XRCC1P18887 633 aaPredicted RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 FADDQ13158 208 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 CEACAM7Q14002 265 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ADGRE1Q14246 886 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 COL13A1Q5TAT6 717 aaPredicted RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 KIAA1211LQ6NV74 962 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 GALNT18Q6P9A2 607 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ABHD11Q8NFV4 315 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 OR2T11Q8NH01 316 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 FIG4Q92562 907 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 SLC45A3Q96JT2 553 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 PPM1MQ96MI6 270 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 KCNC2Q96PR1 638 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 HBEGFQ99075 208 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 C3orf14Q9HBI5 128 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 LTB4R2Q9NPC1 389 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 IRAK4Q9NWZ3 460 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 THEGQ9P2T0 379 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 ZNF451Q9Y4E5 1061 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 PTGDR2Q9Y5Y4 395 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ALPK3Q96L96 1907 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 KCNE1BA0A087WTH5 132 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 RNASET2O00584 256 aaKnown RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 PDPK1O15530 556 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 C7P10643 843 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ALPPL2P10696 532 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 GM2AP17900 193 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 SDC1P18827 310 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 RFX4Q33E94 735 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 MANEAQ5SRI9 462 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 DEPDC1Q5TB30 811 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 IZUMO2Q6UXV1 221 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ZBTB49Q6ZSB9 765 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 RNF148Q8N7C7 305 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 MFSD2AQ8NA29 543 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 C11orf65Q8NCR3 313 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 CHTF18Q8WVB6 975 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 USP36Q9P275 1121 aaKnown RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 PADI4Q9UM07 663 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 MRPS33Q9Y291 106 aaKnown RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 ZNF780BQ9Y6R6 833 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 TMEM202A6NGA9 273 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 IGLV3-19P01714 112 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 C8BP07358 591 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ZCCHC18P0CG32 403 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 SLC6A2P23975 617 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 CXCL12P48061 93 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 METAP1P53582 386 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 SLC2A7Q6PXP3 512 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 SUSD1Q6UWL2 747 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 GCNT7Q6ZNI0 430 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 OR52E1Q8NGJ3 308 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 ADAMTS18Q8TE60 1221 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 NAT14Q8WUY8 206 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 OR5P2Q8WZ92 322 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 SCARF2Q96GP6 870 aaPredicted RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 CENPNQ96H22 339 aaPredicted RBP8.07□□□□□ -1.12
USP54-203ENST00000418501 RAB26Q9ULW5 256 aa8.07□□□□□ -1.12
USP54-203ENST00000418501 FBP2O00757 339 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ADAM23O75077 832 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 TGFB1P01137 390 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ASGR2P07307 311 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 RAP2AP10114 183 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 MAPK10P53779 464 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 CCINQ13939 588 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 GCNT6Q5T4J0 391 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ATAD3BQ5T9A4 648 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 SLC30A9Q6PML9 568 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 CYP4Z1Q86W10 505 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 KRT73Q86Y46 540 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 FUNDC1Q8IVP5 155 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 SVOPLQ8N434 492 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 REXO5Q96IC2 774 aaKnown RBP8.06□□□□□ -1.12
USP54-203ENST00000418501 MAGIXQ9H6Y5 334 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ARMC1Q9NVT9 282 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 GIMAP2Q9UG22 337 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 FAF1Q9UNN5 650 aaPredicted RBP8.06□□□□□ -1.12
USP54-203ENST00000418501 A0A1W2PRB8 838 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ARPC2O15144 300 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 AXIN1O15169 862 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 LRATO95237 230 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 AGR2O95994 175 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ALDH9A1P49189 494 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 CCT8P50990 548 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
USP54-203ENST00000418501 PRRT3Q5FWE3 981 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 CYP2R1Q6VVX0 501 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ZNF547Q8IVP9 402 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 METTL25Q8N6Q8 603 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 ZNF555Q8NEP9 628 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 CLHC1Q8NHS4 586 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 TMEM125Q96AQ2 219 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 DUS3LQ96G46 650 aaKnown RBP8.06□□□□□ -1.12
USP54-203ENST00000418501 APIPQ96GX9 242 aa8.06□□□□□ -1.12
USP54-203ENST00000418501 AHCYL2Q96HN2 611 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms