RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 CAPRIN1Q14444 709 aaKnown RBP11.92□□□□□ -0.5
CHMP3-204ENST00000409727 HKDC1Q2TB90 917 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 PGS1Q32NB8 556 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SPANXN4Q5MJ08 99 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 ARMC6Q6NXE6 501 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SLC2A7Q6PXP3 512 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 OOSP2Q86WS3 158 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 GATAD2AQ86YP4 633 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SCUBE1Q8IWY4 988 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 C10orf67Q8IYJ2 551 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 ULK2Q8IYT8 1036 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SLC25A45Q8N413 288 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 FAM13CQ8NE31 585 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 CCDC124Q96CT7 223 aaKnown RBP11.92□□□□□ -0.5
CHMP3-204ENST00000409727 ELF4Q99607 663 aaPredicted RBP11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SYNPO2LQ9H987 977 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SLC52A3Q9NQ40 469 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 FBXO4Q9UKT5 387 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 SNX7Q9UNH6 387 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 HEATR5BQ9P2D3 2071 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 TMEM131Q92545 1883 aa11.92□□□□□ -0.5
CHMP3-204ENST00000409727 A0A088AWK7 358 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ARHGAP10A1A4S6 786 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 OR5K3A6NET4 321 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 NDUFS4O43181 175 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 UBXN7O94888 489 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 TIA1P31483 386 aaKnown RBP eCLIP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 DPP6P42658 865 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ARRB1P49407 418 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ERFP50548 548 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 CLDN8P56748 225 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ELF3P78545 371 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 SIM2Q14190 667 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 SHBQ15464 509 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PAGE3Q5JUK9 113 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 KHDRBS2Q5VWX1 349 aaKnown RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ZNF425Q6IV72 752 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ANKRD26P1Q6NSI1 321 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 SPESP1Q6UW49 350 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PARP9Q8IXQ6 854 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 RBM12BQ8IXT5 1001 aaKnown RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PGAM4Q8N0Y7 254 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ARHGAP24Q8N264 748 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 RNF148Q8N7C7 305 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PCYOX1LQ8NBM8 494 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 CDRT15Q96T59 188 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 MS4A8Q9BY19 250 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 TRIM8Q9BZR9 551 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 CLMPQ9H6B4 373 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 NT5DC2Q9H857 520 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 EVA1BQ9NVM1 165 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ADA2Q9NZK5 511 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 MAP10Q9P2G4 905 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 SUSD2Q9UGT4 822 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ADGRE2Q9UHX3 823 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PPT2Q9UMR5 302 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 TSC22D4Q9Y3Q8 395 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 A0A0C4DFX4 3053 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 NCOR1O75376 2440 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 A0A0J9YVX5 310 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 BDP1A6H8Y1 2624 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 FAM221BA6H8Z2 402 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PATE3B3GLJ2 98 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PLPP1O14494 284 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ALDH4A1P30038 563 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 HNRNPH1P31943 449 aaKnown RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 FASLGP48023 281 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PLA2G16P53816 162 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PSME3P61289 254 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 NFYCQ13952 458 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 C14orf28Q4W4Y0 310 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 FBXW10Q5XX13 1052 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 IRGCQ6NXR0 463 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 FIGLAQ6QHK4 219 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PAQR7Q86WK9 346 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 METTL4Q8N3J2 472 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 TBC1D19Q8N5T2 526 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 CREB3L4Q8TEY5 395 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 FCRL1Q96LA6 429 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 PITHD1Q9GZP4 211 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 REXO4Q9GZR2 422 aaKnown RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 KLHL31Q9H511 634 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ERVMER34-1Q9H9K5 563 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 IL21RQ9HBE5 538 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 NDE1Q9NXR1 346 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 SLAMF8Q9P0V8 285 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 LEF1Q9UJU2 399 aaPredicted RBP11.91□□□□□ -0.5
CHMP3-204ENST00000409727 ENTPD2Q9Y5L3 495 aa11.91□□□□□ -0.5
CHMP3-204ENST00000409727 FAM86C2PA6NEL3 165 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 RHPN2P1A8MT19 583 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 CTSVO60911 334 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 EEDO75530 441 aaKnown RBP11.9□□□□□ -0.5
CHMP3-204ENST00000409727 B3GALT4O96024 378 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 PGRP06401 933 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 SP9P0CG40 484 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 HRH2P25021 359 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 AVPR2P30518 371 aa11.9□□□□□ -0.5
CHMP3-204ENST00000409727 SERPINB1P30740 379 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms