RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 C22orf42Q6IC83 251 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 LSM14AQ8ND56 463 aaKnown RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 SLC22A17Q8WUG5 538 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 TBX5Q99593 518 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 SLC22A14Q9Y267 594 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 MAN2B2Q9Y2E5 1009 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 MEIOCA2RUB1 952 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 SEPT4O43236 478 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 ONECUT3O60422 494 aaPredicted RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 ERP29P30040 261 aaKnown RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 HEPACAMQ14CZ8 416 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 VMACQ2NL98 169 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 CCDC120Q96HB5 630 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 OSGEPL1Q9H4B0 414 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 DHRS7Q9Y394 339 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 NRAPQ86VF7 1730 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 KIF13BQ9NQT8 1826 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 LRG1P02750 347 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 TNFRSF1BP20333 461 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 CPN2P22792 545 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 FAAH2Q6GMR7 532 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 KIAA1161Q6NSJ0 714 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 MBOAT1Q6ZNC8 495 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 Q8N402 240 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 TBC1D19Q8N5T2 526 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 ZNF433Q8N7K0 673 aaPredicted RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 PCSK9Q8NBP7 692 aaKnown RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 PROKR1Q8TCW9 393 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 ADAMTS16Q8TE57 1224 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 CD244Q9BZW8 370 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 SLC32A1Q9H598 525 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 TRBC2A0A5B9 178 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 FZD9O00144 591 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 GBAP04062 536 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 CLCN4P51793 760 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 SETMARQ53H47 684 aaPredicted RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 LRRC73Q5JTD7 316 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 NFKBIDQ8NI38 313 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 C1orf74Q96LT6 269 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 ATOH8Q96SQ7 321 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 MCMBPQ9BTE3 642 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 RANGRFQ9HD47 186 aaPredicted RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 SCML2Q9UQR0 700 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 RUVBL1Q9Y265 456 aaKnown RBP13.81□□□□□ -0.2
RTF1-201ENST00000389629 ACTL7AQ9Y615 435 aa13.81□□□□□ -0.2
RTF1-201ENST00000389629 BTAF1O14981 1849 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 A0A0U1RQS6 177 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 LDB2O43679 373 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 OR7A10O76100 309 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 PTX3P26022 381 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 RACK1P63244 317 aaKnown RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 DEFA5Q01523 94 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 SNX20Q7Z614 316 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 TMEM151AQ8N4L1 468 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 OR6C4Q8NGE1 309 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 OR5H6Q8NGV6 325 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 SMG7Q92540 1137 aaKnown RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 SUSD3Q96L08 255 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 ERMAPQ96PL5 475 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 BCL7BQ9BQE9 202 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 TEX28O15482 410 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 EBLN1P0CF75 366 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 ARNTP27540 789 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 POLR2LP62875 67 aaKnown RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 DPY19L1Q2PZI1 675 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 FRG2Q64ET8 278 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 SHQ1Q6PI26 577 aaKnown RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 ZNF730Q6ZMV8 503 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 ADGRD2Q7Z7M1 963 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 MAGEB10Q96LZ2 347 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 FRG2BQ96QU4 278 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 KCNH6Q9H252 994 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 SEC14L4Q9UDX3 406 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 CPSF4LA6NMK7 179 aaKnown RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 SLC6A4P31645 630 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 AP2S1P53680 142 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 ZNF691Q5VV52 312 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 Q6ZPB1 254 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 TICAM1Q8IUC6 712 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 KRT78Q8N1N4 520 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 FAM129BQ96TA1 746 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 C11orf84Q9BUA3 381 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 DPCDQ9BVM2 203 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 MND1Q9BWT6 205 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 RABL2BQ9UNT1 228 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 NOX1Q9Y5S8 564 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 CAPNS1P04632 268 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 MAD2L1BPQ15013 274 aaPredicted RBP13.8□□□□□ -0.2
RTF1-201ENST00000389629 CHRNA6Q15825 494 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 FAM110CQ1W6H9 321 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 OR52L1Q8NGH7 329 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 FUBP3Q96I24 572 aaKnown RBP eCLIP13.8□□□□□ -0.2
RTF1-201ENST00000389629 TEX37Q96LM6 180 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 NUP205Q92621 2012 aa13.8□□□□□ -0.2
RTF1-201ENST00000389629 PRRC2BQ5JSZ5 2229 aaKnown RBP13.79□□□□□ -0.2
RTF1-201ENST00000389629 GJB3O75712 270 aa13.79□□□□□ -0.2
RTF1-201ENST00000389629 RPS17P08708 135 aaKnown RBP13.79□□□□□ -0.2
RTF1-201ENST00000389629 BMP7P18075 431 aa13.79□□□□□ -0.2
RTF1-201ENST00000389629 ADRA1AP35348 466 aa13.79□□□□□ -0.2
RTF1-201ENST00000389629 NSG1P42857 185 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms