RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 MAGEA6P43360 314 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 AVPR1BP47901 424 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 MAT1AQ00266 395 aaKnown RBP12.38□□□□□ -0.43
TPM1-220ENST00000559556 PMP22Q01453 160 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 RPS6KA1Q15418 735 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 ZNF470Q6ECI4 717 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 NEPROQ6NW34 567 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 LANCL3Q6ZV70 420 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 GSTA5Q7RTV2 222 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 PRSS41Q7RTY9 318 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 GDF7Q7Z4P5 450 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 VN1R4Q7Z5H5 301 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 CPEB2Q7Z5Q1 589 aaKnown RBP12.38□□□□□ -0.43
TPM1-220ENST00000559556 ADCK2Q7Z695 626 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 PLD3Q8IV08 490 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 AMER2Q8N7J2 671 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 PRELID2Q8N945 189 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 OR9A4Q8NGU2 314 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 MAIP1Q8WWC4 291 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 METTL21AQ8WXB1 218 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 KCNJ9Q92806 393 aa12.38□□□□□ -0.43
TPM1-220ENST00000559556 C19orf25Q9UFG5 118 aaPredicted RBP12.38□□□□□ -0.43
TPM1-220ENST00000559556 ZNF469Q96JG9 3925 aaPredicted RBP12.38□□□□□ -0.43
TPM1-220ENST00000559556 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.37□□□□□ -0.43
TPM1-220ENST00000559556 KCNE1BA0A087WTH5 132 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 FAM237BA0A1B0GVD1 139 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 KIF5CO60282 957 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 AVILO75366 819 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 FGGP02679 453 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 POU3F2P20265 443 aaPredicted RBP12.37□□□□□ -0.43
TPM1-220ENST00000559556 HRH2P25021 359 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 KCNJ1P48048 391 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 RPS15AP62244 130 aaKnown RBP12.37□□□□□ -0.43
TPM1-220ENST00000559556 RBPJQ06330 500 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 CUL1Q13616 776 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 ZNF630Q2M218 657 aaPredicted RBP12.37□□□□□ -0.43
TPM1-220ENST00000559556 ZNF766Q5HY98 468 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 THEMIS2Q5TEJ8 643 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 PCGF5Q86SE9 256 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 MRGPRGQ86SM5 289 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 CAND1Q86VP6 1230 aaKnown RBP12.37□□□□□ -0.43
TPM1-220ENST00000559556 CYTH2Q99418 400 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 CHST11Q9NPF2 352 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 TMEM184CQ9NVA4 438 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 STMN3Q9NZ72 180 aa12.37□□□□□ -0.43
TPM1-220ENST00000559556 FLNAP21333 2647 aaKnown RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 ACANP16112 2415 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 IGHV3-20A0A0C4DH32 117 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 H7BY64 318 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 EIF3FO00303 357 aaPredicted RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 SLC19A2O60779 497 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 HTR1EP28566 365 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 XCR1P46094 333 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 AGTR2P50052 363 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 TBPL1P62380 186 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 SARNPP82979 210 aaKnown RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 SRSF11Q05519 484 aaKnown RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 PTK6Q13882 451 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 DHX34Q14147 1143 aaKnown RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 BTBD16Q32M84 506 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 MINDY4Q4G0A6 757 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 ACER2Q5QJU3 275 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 TMEM214Q6NUQ4 689 aaKnown RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 ZNF549Q6P9A3 640 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 ANKRD37Q7Z713 158 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 BEST3Q8N1M1 668 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 MDS2Q8NDY4 140 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 OR51Q1Q8NH59 317 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 CD200R1Q8TD46 325 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 ZNF669Q96BR6 464 aaPredicted RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 ZNF354BQ96LW1 612 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 PRAP1Q96NZ9 151 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 CCDC68Q9H2F9 335 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 CCDC177Q9NQR7 707 aaPredicted RBP12.36□□□□□ -0.43
TPM1-220ENST00000559556 ABCF3Q9NUQ8 709 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 SAMD15Q9P1V8 674 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 DHRS7Q9Y394 339 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 COMMD10Q9Y6G5 202 aa12.36□□□□□ -0.43
TPM1-220ENST00000559556 CTAGE9A4FU28 777 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 ZBTB14O43829 449 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 STATHP02808 62 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 F7P08709 466 aaPredicted RBP12.35□□□□□ -0.43
TPM1-220ENST00000559556 MLNP12872 115 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 IL1RNP18510 177 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 AGAP20933 346 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 BCL6P41182 706 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 SLC1A2P43004 574 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 ADORA2A-AS1P86434 159 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 CTBP1Q13363 440 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 TUBA3CQ13748 450 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 ZXDCQ2QGD7 858 aaPredicted RBP12.35□□□□□ -0.43
TPM1-220ENST00000559556 MFSD4BQ5TF39 518 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 ANKRD22Q5VYY1 191 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 TUBA3EQ6PEY2 450 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 XKRXQ6PP77 449 aa12.35□□□□□ -0.43
TPM1-220ENST00000559556 CYHR1Q6ZMK1 362 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms