RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 ERVK-10P10266 1014 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 ATP5DP30049 168 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 BDKRB1P46663 353 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 EMP2P54851 167 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 KCNK10P57789 538 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 ARF3P61204 181 aaPredicted RBP11.25□□□□□ -0.61
CKAP4-202ENST00000552828 YBX1P67809 324 aaKnown RBP11.25□□□□□ -0.61
CKAP4-202ENST00000552828 GUCY2DQ02846 1103 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 RELAQ04206 551 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 FRG1Q14331 258 aaKnown RBP11.25□□□□□ -0.61
CKAP4-202ENST00000552828 GBX1Q14549 363 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 TRADDQ15628 312 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.25□□□□□ -0.61
CKAP4-202ENST00000552828 GLIPR1L2Q4G1C9 344 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 STEAP4Q687X5 459 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 TMEM205Q6UW68 189 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 DENND6AQ8IWF6 608 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 PALM2Q8IXS6 379 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 PRSS58Q8IYP2 241 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 FBXO36Q8NEA4 188 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 DNAJB8Q8NHS0 232 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 FBXO25Q8TCJ0 367 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 ITLN2Q8WWU7 325 aaPredicted RBP11.25□□□□□ -0.61
CKAP4-202ENST00000552828 CERS2Q96G23 380 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 FOPNLQ96NB1 174 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 BIRC8Q96P09 236 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 PLCD4Q9BRC7 762 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 DPH7Q9BTV6 452 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 ZNF700Q9H0M5 742 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 CCDC68Q9H2F9 335 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 SYNPO2LQ9H987 977 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 SAYSD1Q9NPB0 183 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 FAM114A2Q9NRY5 505 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 C14orf105Q9NVL8 296 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 ABI3Q9P2A4 366 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 PTGFRNQ9P2B2 879 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 STOX2Q9P2F5 926 aaPredicted RBP11.25□□□□□ -0.61
CKAP4-202ENST00000552828 FBXO5Q9UKT4 447 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 ADGRG4Q8IZF6 3080 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 CELSR1Q9NYQ6 3014 aa11.25□□□□□ -0.61
CKAP4-202ENST00000552828 IGKV1-8A0A0C4DH67 115 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 ESYT3A0FGR9 886 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 ICAM2P13598 275 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 PKMP14618 531 aaKnown RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 CHRM3P20309 590 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 CXCR2P25025 360 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 CMPK1P30085 196 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 SLC1A2P43004 574 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 AP2B1P63010 937 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 FASTKQ14296 549 aaKnown RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 NAA30Q147X3 362 aaPredicted RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 ARHGAP19Q14CB8 494 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 FASTKD3Q14CZ7 662 aaKnown RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 CTSL3PQ5NE16 218 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 GARNL3Q5VVW2 1013 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 CNSTQ6PJW8 725 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 ZDHHC24Q6UX98 284 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 KIAA0408Q6ZU52 694 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 PAQR7Q86WK9 346 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 AMER3Q8N944 861 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 C2CD4AQ8NCU7 369 aaPredicted RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 SKA2Q8WVK7 121 aaPredicted RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 CABS1Q96KC9 395 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 IMMP1LQ96LU5 166 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 MAGEB10Q96LZ2 347 aaPredicted RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 OR2A5Q96R48 311 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 WDR83Q9BRX9 315 aaKnown RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 PHACTR1Q9C0D0 580 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 PLAC1Q9HBJ0 212 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 MKKSQ9NPJ1 570 aaPredicted RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 FBXO6Q9NRD1 293 aaPredicted RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 RIC8BQ9NVN3 520 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 TRPC4Q9UBN4 977 aa11.24□□□□□ -0.61
CKAP4-202ENST00000552828 RUVBL2Q9Y230 463 aaKnown RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 RUVBL1Q9Y265 456 aaKnown RBP11.24□□□□□ -0.61
CKAP4-202ENST00000552828 SVILO95425 2214 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 E5RI56 91 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 MYO1CO00159 1063 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 FOXS1O43638 330 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 VPS26AO75436 327 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 PSIP1O75475 530 aaKnown RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 WFS1O76024 890 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 HAUS5O94927 633 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 WDPCPO95876 746 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 CRYABP02511 175 aaKnown RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 HEXBP07686 556 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 MST1P26927 711 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 GRNP28799 593 aaKnown RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 PTGER4P35408 488 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 HSD17B2P37059 387 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 CA7P43166 264 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 MPP1Q00013 466 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 PRDX1Q06830 199 aaKnown RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 PCOLCEQ15113 449 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 ZNF630Q2M218 657 aaPredicted RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 TEDDM1Q5T9Z0 273 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 ZNF425Q6IV72 752 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 MTFR2Q6P444 385 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 TRMT10BQ6PF06 316 aaKnown RBP11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms