RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 GRM7Q14831 915 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 PDK4Q16654 411 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 ARHGAP40Q5TG30 622 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 ZNF517Q6ZMY9 492 aaPredicted RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 SLCO4C1Q6ZQN7 724 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 SH2D5Q6ZV89 423 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 ANKRD53Q8N9V6 530 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 TTC29Q8NA56 475 aaPredicted RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 OR4K1Q8NGD4 311 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 STARD8Q92502 1023 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 RERGQ96A58 199 aaPredicted RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 CABS1Q96KC9 395 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 NSUN5Q96P11 429 aaKnown RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 NDC1Q9BTX1 674 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 CD244Q9BZW8 370 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 MRPL46Q9H2W6 279 aaKnown RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 CNOT10Q9H9A5 744 aaKnown RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 PELI2Q9HAT8 420 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 SLC22A11Q9NSA0 550 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 TXLNGQ9NUQ3 528 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 GEMIN8Q9NWZ8 242 aaKnown RBP13.37□□□□□ -0.27
VPS11-205ENST00000534551 SRPK3Q9UPE1 567 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 KCNE2Q9Y6J6 123 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 AP1M2Q9Y6Q5 423 aa13.37□□□□□ -0.27
VPS11-205ENST00000534551 A0A1B0GX78 115 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 TRBC2A0A5B9 178 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 A8MT66 165 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 C4orf51C9J302 202 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 DSCR3O14972 297 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 NDUFS4O43181 175 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 KATNA1O75449 491 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 B3GALT4O96024 378 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 SERPIND1P05546 499 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 COL6A2P12110 1019 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 TCN2P20062 427 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 ALAS2P22557 587 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 EEF1DP29692 281 aaKnown RBP13.36□□□□□ -0.27
VPS11-205ENST00000534551 SCTRP47872 440 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 ALDH18A1P54886 795 aaKnown RBP13.36□□□□□ -0.27
VPS11-205ENST00000534551 TMPRSS3P57727 454 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 ZNF844Q08AG5 666 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 IL10RAQ13651 578 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 TCTE1Q5JU00 501 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 CDKL4Q5MAI5 379 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 BROXQ5VW32 411 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 GOLGA7Q7Z5G4 137 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 ASPGQ86U10 573 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 ENDOVQ8N8Q3 282 aaKnown RBP13.36□□□□□ -0.27
VPS11-205ENST00000534551 KCT2Q8NC54 265 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 LRFN5Q96NI6 719 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 AICDAQ9GZX7 198 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 ACTL8Q9H568 366 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 OPTCQ9UBM4 332 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 CTSFQ9UBX1 484 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 PADI1Q9ULC6 663 aa13.36□□□□□ -0.27
VPS11-205ENST00000534551 ZNF860A6NHJ4 632 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 K7EPI3 171 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 E2F3O00716 465 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 NKX2-8O15522 239 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 SRPX2O60687 465 aaPredicted RBP13.35□□□□□ -0.27
VPS11-205ENST00000534551 RBP1P09455 135 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 FURINP09958 794 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 CCNYL3P0C7X3 344 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 C1GALT1C1LP0DN25 315 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 CREB1P16220 341 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 IL1RNP18510 177 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 TSPAN8P19075 237 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 GNAZP19086 355 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 DOC2AQ14183 400 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 NCF4Q15080 339 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 RASA2Q15283 850 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 RBBP5Q15291 538 aaKnown RBP13.35□□□□□ -0.27
VPS11-205ENST00000534551 SYT16Q17RD7 645 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 XKR6Q5GH73 641 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 ATG9BQ674R7 924 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 CCDC81Q6ZN84 652 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 VN1R5Q7Z5H4 357 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 RNF175Q8N4F7 328 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 PROKR1Q8TCW9 393 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 ACMSDQ8TDX5 336 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 KIAA1143Q96AT1 154 aaPredicted RBP13.35□□□□□ -0.27
VPS11-205ENST00000534551 ZIM3Q96PE6 472 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 TMEM237Q96Q45 408 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 MRPL57Q9BQC6 102 aaKnown RBP13.35□□□□□ -0.27
VPS11-205ENST00000534551 AIF1LQ9BQI0 150 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 PRORYQ9H606 182 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 LGALS13Q9UHV8 139 aa13.35□□□□□ -0.27
VPS11-205ENST00000534551 RALYQ9UKM9 306 aaKnown RBP13.35□□□□□ -0.27
VPS11-205ENST00000534551 MED13Q9UHV7 2174 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 A0A0A6YYC8 382 aaPredicted RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 I3L1I5 382 aaPredicted RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 K7ENP7 123 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 CLGNO14967 610 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 FOXS1O43638 330 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 GLRA3O75311 464 aa13.34□□□□□ -0.27
VPS11-205ENST00000534551 KLK3P07288 261 aaPredicted RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 RPS17P08708 135 aaKnown RBP13.34□□□□□ -0.27
VPS11-205ENST00000534551 KRT4P19013 534 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms