RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 PHGDHO43175 533 aaKnown RBP16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 FAM155BO75949 473 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 GRK3P35626 688 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 CCR8P51685 355 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 SOX8P57073 446 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 CDKL1Q00532 357 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 MEF2AQ02078 507 aaPredicted RBP16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 RBBP7Q16576 425 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 CATSPEREQ5SY80 951 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 GRTP1Q5TC63 336 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 GALNT16Q8N428 558 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 MMGT1Q8N4V1 131 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 PPM1NQ8N819 430 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 MFSD9Q8NBP5 474 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 CAMKVQ8NCB2 501 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 NEIL2Q969S2 332 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 TSPAN17Q96FV3 270 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 SMAD5Q99717 465 aaKnown RBP16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 MESP1Q9BRJ9 268 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 DERL2Q9GZP9 239 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 C3orf18Q9UK00 162 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 G3BP2Q9UN86 482 aaKnown RBP16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 SLC22A14Q9Y267 594 aa16.98■□□□□ 0.31
TRAPPC9-211ENST00000521700 ALOX12BO75342 701 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 ZIC2O95409 532 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 ANXA5P08758 320 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 CCDC166P0CW27 439 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 STMN1P16949 149 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 SPRP35270 261 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 CSRP3P50461 194 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 MAT1AQ00266 395 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 CSHL1Q14406 222 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 MYBPC3Q14896 1274 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 SYT16Q17RD7 645 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 NADK2Q4G0N4 442 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 TMEM214Q6NUQ4 689 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 ADAMTSL2Q86TH1 951 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 ASPGQ86U10 573 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 THOC6Q86W42 341 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 KCT2Q8NC54 265 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 NOA1Q8NC60 698 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 OR11G2Q8NGC1 345 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 OR9A4Q8NGU2 314 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 SLC13A3Q8WWT9 602 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 SLC5A11Q8WWX8 675 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 EGFL8Q99944 293 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 SARGQ9BW04 601 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 ZNF552Q9H707 407 aaPredicted RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 DMGDHQ9UI17 866 aaKnown RBP16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 MAP4K5Q9Y4K4 846 aa16.97■□□□□ 0.31
TRAPPC9-211ENST00000521700 H0YIG0 161 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 OR1F1O43749 312 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 STX2P32856 288 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 AVPR1BP47901 424 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 HNMTP50135 292 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 EMP2P54851 167 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 KCNC4Q03721 635 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 AIMP2Q13155 320 aaKnown RBP16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 ZKSCAN8Q15776 578 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 C18orf21Q32NC0 220 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 ATG9BQ674R7 924 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 FRA10AC1Q70Z53 315 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 PRSS41Q7RTY9 318 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 SHISA5Q8N114 240 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 ZNF740Q8NDX6 193 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 RHBDF1Q96CC6 855 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 TSNARE1Q96NA8 513 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 FAM129AQ9BZQ8 928 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 TGIF2Q9GZN2 237 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 SPNS1Q9H2V7 528 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 MKKSQ9NPJ1 570 aaPredicted RBP16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 C5AR2Q9P296 337 aa16.96■□□□□ 0.31
TRAPPC9-211ENST00000521700 SCN3AQ9NY46 2000 aa16.96■□□□□ 0.3
TRAPPC9-211ENST00000521700 TRBC2A0A5B9 178 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 IDSB3KWA1 339 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 DPM1O60762 260 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 NSA2O95478 260 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 TUBB4AP04350 444 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 CD1DP15813 335 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 IL1RNP18510 177 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 GMPRP36959 345 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 GDF5P43026 501 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 MLLT10P55197 1068 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 RAB10P61026 200 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 EFTUD2Q15029 972 aaKnown RBP eCLIP16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 TGFBIQ15582 683 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 IGFBP7Q16270 282 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 TUBB8Q3ZCM7 444 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 VWA5B1Q5TIE3 1220 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 HPS6Q86YV9 775 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 ZC3H7AQ8IWR0 971 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 RBMXL3Q8N7X1 1067 aaKnown RBP16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 C8orf44Q96CB5 159 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 MOCOSQ96EN8 888 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 UBXN10Q96LJ8 280 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 C14orf105Q9NVL8 296 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 DYRK1BQ9Y463 629 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 KCNE2Q9Y6J6 123 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 TENM4Q6N022 2769 aa16.95■□□□□ 0.3
TRAPPC9-211ENST00000521700 DOCK10Q96BY6 2186 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms