RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 C19orf47Q8N9M1 422 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 L3MBTL4Q8NA19 623 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 AGBL5Q8NDL9 886 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 FLVCR1-AS1Q8TAF5 88 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 METTL6Q8TCB7 284 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CKAP2Q8WWK9 683 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 KLHL6Q8WZ60 621 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 WDR34Q96EX3 536 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 NSUN5Q96P11 429 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CCT7Q99832 543 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 GSTO2Q9H4Y5 243 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF768Q9H5H4 540 aaKnown RBP9.74□□□□□ -0.85
NEDD9-214ENST00000513989 ELOVL6Q9H5J4 265 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 NT5DC2Q9H857 520 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 MID1IP1Q9NPA3 183 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 NMRK1Q9NWW6 199 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 SERTAD3Q9UJW9 196 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 PLCL2Q9UPR0 1127 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 CLCA2Q9UQC9 943 aa9.74□□□□□ -0.85
NEDD9-214ENST00000513989 COL6A6A6NMZ7 2263 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 A0A087WV48 116 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 TRBC2A0A5B9 178 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 URADA6NGE7 173 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 SLCO1B7G3V0H7 640 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 H0YIV9 168 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 OR7A17O14581 309 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 KIF1CO43896 1103 aaKnown RBP9.73□□□□□ -0.85
NEDD9-214ENST00000513989 ULK1O75385 1050 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 FGF4P08620 206 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 UROSP10746 265 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 TSPAN8P19075 237 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 VARSP26640 1264 aaKnown RBP9.73□□□□□ -0.85
NEDD9-214ENST00000513989 HMOX2P30519 316 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CCKBRP32239 447 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CSF2RBP32927 897 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 AHRP35869 848 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 SEPHS1P49903 392 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 RPL14P50914 215 aaKnown RBP9.73□□□□□ -0.85
NEDD9-214ENST00000513989 PPP1CAP62136 330 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 SH3BP2P78314 561 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF33BQ06732 778 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 BST1Q10588 318 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 EIF3IQ13347 325 aaKnown RBP9.73□□□□□ -0.85
NEDD9-214ENST00000513989 SLBPQ14493 270 aaKnown RBP eCLIP9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CPSF6Q16630 551 aaKnown RBP eCLIP9.73□□□□□ -0.85
NEDD9-214ENST00000513989 GGTA1PQ4G0N0 100 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 TCTE1Q5JU00 501 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 MANEAQ5SRI9 462 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CATSPEREQ5SY80 951 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CDCP2Q5VXM1 449 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 GRHL2Q6ISB3 625 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF425Q6IV72 752 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 FBXO42Q6P3S6 717 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CUZD1Q86UP6 607 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 PAQR7Q86WK9 346 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 FAM20CQ8IXL6 584 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 D2HGDHQ8N465 521 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CAMKVQ8NCB2 501 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 TRPV3Q8NET8 790 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 OR4F6Q8NGB9 312 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 OR6Y1Q8NGX8 325 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 OR8K5Q8NH50 307 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 SLC41A2Q96JW4 573 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CCDC74BQ96LY2 380 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 ZFYVE21Q9BQ24 234 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 CENPKQ9BS16 269 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 SARGQ9BW04 601 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 SLC29A3Q9BZD2 475 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 KLHL25Q9H0H3 589 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 ZBTB26Q9HCK0 441 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 IRAK4Q9NWZ3 460 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 GEMIN8Q9NWZ8 242 aaKnown RBP9.73□□□□□ -0.85
NEDD9-214ENST00000513989 TRPS1Q9UHF7 1281 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 BTRCQ9Y297 605 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 RNF11Q9Y3C5 154 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 RAP2CQ9Y3L5 183 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 TRAF6Q9Y4K3 522 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 ASB1Q9Y576 335 aa9.73□□□□□ -0.85
NEDD9-214ENST00000513989 PIKFYVEQ9Y2I7 2098 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 IGKV1-8A0A0C4DH67 115 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 OR2A25A4D2G3 310 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 AZIN1O14977 448 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 POLR3GO15318 223 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-214ENST00000513989 TLX3O43711 291 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-214ENST00000513989 SERPIND1P05546 499 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 MSL3P1P0C860 447 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 PCNAP12004 261 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 PVRP15151 417 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 ST6GAL1P15907 406 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 EPORP19235 508 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 PTX3P26022 381 aaPredicted RBP9.72□□□□□ -0.85
NEDD9-214ENST00000513989 PIK3CBP42338 1070 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 LSSP48449 732 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 HK2P52789 917 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 ERVPABLB-1P60509 514 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 RGS1Q08116 209 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 TGM3Q08188 693 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 IL11RAQ14626 422 aa9.72□□□□□ -0.85
NEDD9-214ENST00000513989 ZRSR2Q15696 482 aaKnown RBP9.72□□□□□ -0.85
NEDD9-214ENST00000513989 ISXQ2M1V0 245 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms