RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 EZRP15311 586 aaKnown RBP18.56■□□□□ 0.56
USP39-218ENST00000493829 AQP5P55064 265 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 B3GNT8Q7Z7M8 397 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 OR4D9Q8NGE8 314 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 HUS1BQ8NHY5 278 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 ZUFSPQ96AP4 578 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 REPS1Q96D71 796 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 C19orf60Q96EN9 201 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 TRIM55Q9BYV6 548 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 ANKMY1Q9P2S6 941 aa18.56■□□□□ 0.56
USP39-218ENST00000493829 ADAMTS20P59510 1910 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 A0A0G2JND7 137 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 GOLGA8QA0A0J9YX86 632 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 SPAARA0A1B0GVQ0 90 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 ATP6AP2A0A1C7CYW4 349 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 GOLGA8OA6NCC3 632 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 GOLGA8NF8WBI6 632 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 NTN3O00634 580 aaPredicted RBP18.55■□□□□ 0.56
USP39-218ENST00000493829 HDAC3O15379 428 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 DIAPH2O60879 1101 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 ULK1O75385 1050 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 ATP6AP2O75787 350 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 ZBTB11O95625 1053 aaPredicted RBP18.55■□□□□ 0.56
USP39-218ENST00000493829 THRAP10827 490 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 SCTRP47872 440 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 LIMK1P53667 647 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 HMGCS1Q01581 520 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 NAA25Q14CX7 972 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 TUBB8Q3ZCM7 444 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 FRMPD2BQ6IN97 320 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 PRSS42Q7Z5A4 293 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 VN1R5Q7Z5H4 357 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 LAS2Q8IYD9 372 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 TBC1D19Q8N5T2 526 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 WDR20Q8TBZ3 569 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 UBE2E3Q969T4 207 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 FAR2Q96K12 515 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 ZFYVE21Q9BQ24 234 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 ELAC2Q9BQ52 826 aaKnown RBP18.55■□□□□ 0.56
USP39-218ENST00000493829 TOR4AQ9NXH8 423 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 GIMAP2Q9UG22 337 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 UNC13CQ8NB66 2214 aa18.55■□□□□ 0.56
USP39-218ENST00000493829 MAGEB17A8MXT2 336 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 RPS15AP62244 130 aaKnown RBP18.54■□□□□ 0.56
USP39-218ENST00000493829 SQSTM1Q13501 440 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 FBXO42Q6P3S6 717 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 RNF44Q7L0R7 432 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 NETO1Q8TDF5 533 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 USP7Q93009 1102 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 TCTN2Q96GX1 697 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 C3orf30Q96M34 536 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 WDR55Q9H6Y2 383 aaPredicted RBP18.54■□□□□ 0.56
USP39-218ENST00000493829 VTI1BQ9UEU0 232 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 PCDHGA4Q9Y5G9 962 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 KLK4Q9Y5K2 254 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 LOC105369274A0A096LPK9 316 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 LOC102723532A0A0G2JNH3 316 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 ANKDD1BA6NHY2 528 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 SLCO1B7G3V0H7 640 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 NDUFS4O43181 175 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 EIF2S1P05198 315 aaKnown RBP18.54■□□□□ 0.56
USP39-218ENST00000493829 RPS13P62277 151 aaKnown RBP18.54■□□□□ 0.56
USP39-218ENST00000493829 IMPG1Q17R60 797 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 SLC9B1Q4ZJI4 515 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 DGLUCYQ7Z3D6 616 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 KIRREL3Q8IZU9 778 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 OR4N4Q8N0Y3 316 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 MFSD9Q8NBP5 474 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 OR2T11Q8NH01 316 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 EBF4Q9BQW3 602 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 ACPTQ9BZG2 426 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 PDE7BQ9NP56 450 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 DMRT3Q9NQL9 472 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 PILRAQ9UKJ1 303 aa18.54■□□□□ 0.56
USP39-218ENST00000493829 COL27A1Q8IZC6 1860 aaPredicted RBP18.53■□□□□ 0.56
USP39-218ENST00000493829 SAP18O00422 153 aaKnown RBP18.53■□□□□ 0.56
USP39-218ENST00000493829 ZNF195O14628 629 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 TGFB1P01137 390 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 CTSBP07858 339 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 EPHA3P29320 983 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 PDX1P52945 283 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 VSX2P58304 361 aaPredicted RBP18.53■□□□□ 0.56
USP39-218ENST00000493829 PHEXP78562 749 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 HSD11B2P80365 405 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 DHRS13Q6UX07 377 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 SPATA21Q7Z572 469 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 SLITRK4Q8IW52 837 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 CCT8L2Q96SF2 557 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 TMEM120AQ9BXJ8 343 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 ZNF768Q9H5H4 540 aaKnown RBP18.53■□□□□ 0.56
USP39-218ENST00000493829 STARD5Q9NSY2 213 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 IRAK4Q9NWZ3 460 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 SLC12A4Q9UP95 1085 aa18.53■□□□□ 0.56
USP39-218ENST00000493829 DMXL1Q9Y485 3027 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 RIF1Q5UIP0 2472 aaKnown RBP18.52■□□□□ 0.56
USP39-218ENST00000493829 GVINP1Q7Z2Y8 2422 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 TRPC5OSA6NMA1 111 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 H0YGG7 62 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 P2RX6O15547 441 aa18.52■□□□□ 0.56
USP39-218ENST00000493829 MAP3K7O43318 606 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms