RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 ATCAYQ86WG3 371 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 OR56A3Q8NH54 315 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 SLC5A11Q8WWX8 675 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 PDLIM5Q96HC4 596 aaKnown RBP12.25□□□□□ -0.45
CHMP3-208ENST00000486404 TSNARE1Q96NA8 513 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 RBBP8Q99708 897 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 MFRPQ9BY79 579 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 FAM129AQ9BZQ8 928 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 ANKHQ9HCJ1 492 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 MLXIPLQ9NP71 852 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 SMYD2Q9NRG4 433 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 MAP4K5Q9Y4K4 846 aa12.25□□□□□ -0.45
CHMP3-208ENST00000486404 FAM159BA6NKW6 160 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 SOCS6O14544 535 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 NDUFS4O43181 175 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 OR1F1O43749 312 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 S100BP04271 92 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-208ENST00000486404 SERPIND1P05546 499 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 STMN1P16949 149 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 IL1RNP18510 177 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 MAGEA4P43358 317 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 SKP1P63208 163 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 SLC7A5Q01650 507 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 MEF2AQ02078 507 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-208ENST00000486404 CBLBQ13191 982 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 FAM53BQ14153 422 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 CSHL1Q14406 222 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 TSNQ15631 228 aaKnown RBP12.24□□□□□ -0.45
CHMP3-208ENST00000486404 VWA2Q5GFL6 755 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 TMEM207Q6UWW9 146 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 VN1R4Q7Z5H5 301 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 TMPRSS11BQ86T26 416 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 CEP97Q8IW35 865 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 TMEM151BQ8IW70 566 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 AMER3Q8N944 861 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 MFSD9Q8NBP5 474 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 MNS1Q8NEH6 495 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 OR9A4Q8NGU2 314 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 SLC13A3Q8WWT9 602 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 ANKRD7Q92527 254 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 SMAD5Q99717 465 aaKnown RBP12.24□□□□□ -0.45
CHMP3-208ENST00000486404 UNKQ9C0B0 810 aaKnown RBP12.24□□□□□ -0.45
CHMP3-208ENST00000486404 DERL2Q9GZP9 239 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 CAB39LQ9H9S4 337 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 SLAMF7Q9NQ25 335 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 HCN3Q9P1Z3 774 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 C5AR2Q9P296 337 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 MAP10Q9P2G4 905 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 IKZF3Q9UKT9 509 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 MTO1Q9Y2Z2 717 aaKnown RBP12.24□□□□□ -0.45
CHMP3-208ENST00000486404 OARD1Q9Y530 152 aa12.24□□□□□ -0.45
CHMP3-208ENST00000486404 UBR5O95071 2799 aaPredicted RBP12.24□□□□□ -0.45
CHMP3-208ENST00000486404 IGLV3-12A0A075B6K2 115 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 KCNE1BA0A087WTH5 132 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NSG1A0A0A6YYJ2 146 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 TRBC2A0A5B9 178 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NCF1BA6NI72 391 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NCF1CA8MVU1 366 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 CXorf49A8MYA2 514 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 IDSB3KWA1 339 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 H0YIG0 161 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 MASP2O00187 686 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 PHGDHO43175 533 aaKnown RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 WDR47O94967 919 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NSA2O95478 260 aaKnown RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NCF1P14598 390 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NPPBP16860 134 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 SPRP35270 261 aaPredicted RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 SLC26A3P40879 764 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 HNMTP50135 292 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 EMP2P54851 167 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 MLLT10P55197 1068 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 FOXK1P85037 733 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 MAT1AQ00266 395 aaKnown RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 CDKL1Q00532 357 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 GUCY2DQ02846 1103 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 EEF1A2Q05639 463 aaKnown RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 RGS1Q08116 209 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NAB1Q13506 487 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 KBTBD12Q3ZCT8 623 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 MINDY4Q4G0A6 757 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 FAAH2Q6GMR7 532 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 KIRREL2Q6UWL6 708 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 ZDHHC24Q6UX98 284 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 CEP128Q6ZU80 1094 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 RAPH1Q70E73 1250 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 THOC6Q86W42 341 aaKnown RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 ZC3H7AQ8IWR0 971 aaKnown RBP12.23□□□□□ -0.45
CHMP3-208ENST00000486404 PPM1NQ8N819 430 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 ABHD11Q8NFV4 315 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 OR11G2Q8NGC1 345 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 ANKRD49Q8WVL7 239 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 EXT2Q93063 718 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 NEIL2Q969S2 332 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 PNPLA2Q96AD5 504 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 C8orf44Q96CB5 159 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 GPR22Q99680 433 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 MACROD1Q9BQ69 325 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 AIF1LQ9BQI0 150 aa12.23□□□□□ -0.45
CHMP3-208ENST00000486404 ILKAPQ9H0C8 392 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms