RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 SLC25A35Q3KQZ1 300 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 CHRFAM7AQ494W8 412 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 CCDC40Q4G0X9 1142 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 FILIP1LQ4L180 1135 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 FLYWCH1Q4VC44 716 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 ANKRD20A8PQ5CZ79 823 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 TXNRD3NBQ6F5E7 133 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 HEPHL1Q6MZM0 1159 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 TIGD7Q6NT04 549 aaPredicted RBP5.54□□□□□ -1.52
NCL-208ENST00000466274 CDHR3Q6ZTQ4 885 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 YTHDF3Q7Z739 585 aaKnown RBP5.54□□□□□ -1.52
NCL-208ENST00000466274 AMZ2Q86W34 360 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 ZNF575Q86XF7 245 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 TRAPPC5Q8IUR0 188 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 CCDC71Q8IV32 467 aaPredicted RBP5.54□□□□□ -1.52
NCL-208ENST00000466274 OR4E2Q8NGC2 313 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 OR10Q1Q8NGQ4 319 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 GPT2Q8TD30 523 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 CALML6Q8TD86 181 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 BRSK1Q8TDC3 778 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 PSMF1Q92530 271 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 CELF6Q96J87 481 aaKnown RBP5.54□□□□□ -1.52
NCL-208ENST00000466274 TRIM51Q9BSJ1 452 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 CRB3Q9BUF7 120 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 PITPNM3Q9BZ71 974 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 SLC39A8Q9C0K1 460 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 SRMSQ9H3Y6 488 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 ACP6Q9NPH0 428 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 HAUS2Q9NVX0 235 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 SLC24A2Q9UI40 661 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 HEBP2Q9Y5Z4 205 aa5.54□□□□□ -1.52
NCL-208ENST00000466274 VPS13CQ709C8 3753 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 C1orf232A0A0U1RR37 186 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 A0A1B0GX78 115 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 KLHL33A6NCF5 533 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 C2orf74A8MZ97 194 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 DNAJB6O75190 326 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 WISP2O76076 250 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 CLDN7O95471 211 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ONECUT2O95948 504 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 CYP11B1P15538 503 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ZNF24P17028 368 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 SDHAP31040 664 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 PTPN9P43378 593 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ME1P48163 572 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 DLX5P56178 289 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 FOXL2P58012 376 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 TPI1P60174 286 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 RPL26P61254 145 aaKnown RBP5.53□□□□□ -1.52
NCL-208ENST00000466274 APBA1Q02410 837 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 LRRC63Q05C16 580 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ZNF33BQ06732 778 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 RABEP1Q15276 862 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 LONRF2Q1L5Z9 754 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 C15orf59Q2T9L4 293 aaPredicted RBP5.53□□□□□ -1.52
NCL-208ENST00000466274 CCDC14Q49A88 953 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 RESP18Q5W5W9 173 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ABHD17CQ6PCB6 329 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 Q6ZRM9 215 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 NLRP9Q7RTR0 991 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 HIPK1Q86Z02 1210 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 SIAH3Q8IW03 269 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ULK2Q8IYT8 1036 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 MARVELD2Q8N4S9 558 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 CCDC185Q8N715 623 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ACVR1CQ8NER5 493 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 GPR150Q8NGU9 434 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 FAM172AQ8WUF8 416 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 LCN9Q8WX39 176 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 RXFP2Q8WXD0 754 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 GLYATL1Q969I3 302 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 FOXRED1Q96CU9 486 aaPredicted RBP5.53□□□□□ -1.52
NCL-208ENST00000466274 CCDC34Q96HJ3 373 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ZNF354BQ96LW1 612 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 C12orf66Q96MD2 445 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 PPM1MQ96MI6 270 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 MGME1Q9BQP7 344 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 UTP23Q9BRU9 249 aaKnown RBP5.53□□□□□ -1.52
NCL-208ENST00000466274 CNPY3Q9BT09 278 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 C19orf24Q9BVV8 132 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 XPO4Q9C0E2 1151 aaKnown RBP5.53□□□□□ -1.52
NCL-208ENST00000466274 CHRNA10Q9GZZ6 450 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 PLEKHF2Q9H8W4 249 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 ARFGAP3Q9NP61 516 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 KLHL1Q9NR64 748 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 SAMSN1Q9NSI8 373 aaKnown RBP5.53□□□□□ -1.52
NCL-208ENST00000466274 GNPTGQ9UJJ9 305 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 RPL26L1Q9UNX3 145 aaKnown RBP5.53□□□□□ -1.52
NCL-208ENST00000466274 DMRT1Q9Y5R6 373 aa5.53□□□□□ -1.52
NCL-208ENST00000466274 TRIM64A6NGJ6 449 aa5.52□□□□□ -1.53
NCL-208ENST00000466274 TRIM64BA6NI03 449 aa5.52□□□□□ -1.53
NCL-208ENST00000466274 VSTM2BA6NLU5 285 aa5.52□□□□□ -1.53
NCL-208ENST00000466274 EIF3CLB5ME19 914 aaKnown RBP5.52□□□□□ -1.53
NCL-208ENST00000466274 SYT5O00445 386 aa5.52□□□□□ -1.53
NCL-208ENST00000466274 TLX2O43763 284 aaPredicted RBP5.52□□□□□ -1.53
NCL-208ENST00000466274 POP7O75817 140 aaKnown RBP5.52□□□□□ -1.53
NCL-208ENST00000466274 LSM8O95777 96 aaKnown RBP5.52□□□□□ -1.53
NCL-208ENST00000466274 SLC35G4P0C7Q5 338 aa5.52□□□□□ -1.53
NCL-208ENST00000466274 KRT4P19013 534 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms