RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TWSG1Q9GZX9 223 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 LOC102724200A0A096LPH7 203 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SHISA7A6NL88 538 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 NRP2O60462 931 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 PSMD10O75832 226 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 APOL3O95236 402 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 TBX18O95935 607 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 GALTP07902 379 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CBSLP0DN79 551 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 OGNP20774 298 aaKnown RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CBSP35520 551 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF267Q14586 743 aaPredicted RBP10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 VHLLQ6RSH7 139 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC16A9Q7RTY1 509 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 C6orf120Q7Z4R8 191 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 GATSQ8NAP1 163 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC39A3Q9BRY0 314 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 SLC39A1Q9NY26 324 aa10.67□□□□□ -0.7
CACNA1C-216ENST00000399638 CLPXO76031 633 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 AHSA1O95433 338 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CD2P06729 351 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 DPP6P42658 865 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CCL11P51671 97 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 DHDDSQ86SQ9 333 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ENDOVQ8N8Q3 282 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 DRAXINQ8NBI3 349 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ZBED6CLQ96FA7 236 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ADAD1Q96M93 576 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 GIN1Q9NXP7 522 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 RPH3ALQ9UNE2 315 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 MYRFQ9Y2G1 1151 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 MYOCOSA0A1B0GUC4 107 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ILVBLA1L0T0 632 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 MYBPHLA2RUH7 354 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 FANCGO15287 622 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ZMPSTE24O75844 475 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 TGFB1P01137 390 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 PNLIPRP1P54315 467 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 YBEYP58557 167 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CAMK2DQ13557 499 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 EIF2B1Q14232 305 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 GPR137CQ8N3F9 429 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 PRELID2Q8N945 189 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 BHLHE22Q8NFJ8 381 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 SUN5Q8TC36 379 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 NANOS1Q8WY41 292 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 SLCO2A1Q92959 643 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 NXPE2Q96DL1 559 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 WDR92Q96MX6 357 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 GSKIPQ9P0R6 139 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 FARSAQ9Y285 508 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF451Q9Y4E5 1061 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 UPK3BL1B0FP48 263 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 UPK3BL2E5RIL1 263 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 M0R129 80 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 AIPO00170 330 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 IRAK2O43187 625 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 PAK4O96013 591 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 SNRPB2P08579 225 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 HBQ1P09105 142 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ARPC4P59998 168 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 TAC4Q86UU9 113 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CLPTM1LQ96KA5 538 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF670Q9BS34 389 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 GPN2Q9H9Y4 310 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 NGBQ9NPG2 151 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 H3BNX3 289 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ADAMTS3O15072 1205 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 GCH1P30793 250 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 NSG1P42857 185 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CERS6Q6ZMG9 384 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ARCQ7LC44 396 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 IRF2BP2Q7Z5L9 587 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CPNE2Q96FN4 548 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 LRFN5Q96NI6 719 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 MRIQ9BWK5 157 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 TCF7L1Q9HCS4 588 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 SQORQ9Y6N5 450 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 LOC102723532A0A0G2JNH3 316 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 WTIPA6NIX2 430 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 FTCDNL1E5RQL4 147 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CCL22O00626 93 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 POP7O75817 140 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 CNOT4O95628 575 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 GOT2P00505 430 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 SOD2P04179 222 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 YAP1P46937 504 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 RPS24P62847 133 aaKnown RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 DLX2Q07687 328 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 TIGD6Q17RP2 521 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 RNF151Q2KHN1 245 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 DEFB133Q30KQ1 61 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ZNF311Q5JNZ3 666 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 ARL5BQ96KC2 179 aa10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 KCTD15Q96SI1 283 aaPredicted RBP10.66□□□□□ -0.7
CACNA1C-216ENST00000399638 FBXO5Q9UKT4 447 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms