RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RAB28P51157 221 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 MUM1Q2TAK8 710 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 NRROSQ86YC3 692 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 FBXL6Q8N531 539 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 DENND6BQ8NEG7 585 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 ASB12Q8WXK4 309 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 MAGEB10Q96LZ2 347 aaPredicted RBP12.1□□□□□ -0.47
CLCN6-206ENST00000376496 SLC6A18Q96N87 628 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 ZNF570Q96NI8 536 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 PKP2Q99959 881 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 SYNPO2LQ9H987 977 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 LTB4R2Q9NPC1 389 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 RUVBL1Q9Y265 456 aaKnown RBP12.1□□□□□ -0.47
CLCN6-206ENST00000376496 PCDHB14Q9Y5E9 798 aa12.1□□□□□ -0.47
CLCN6-206ENST00000376496 SPEGQ15772 3267 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 OR1F1O43749 312 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 TPST1O60507 370 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 KLHL18O94889 574 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 CPSF4O95639 269 aaKnown RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 MT-ND1P03886 318 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 PIM1P11309 404 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 MAPK1P28482 360 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 PKLRP30613 574 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 SLC14A1Q13336 389 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 TAF11Q15544 211 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 ICE2Q659A1 982 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 PRMT9Q6P2P2 845 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 ZNF761Q86XN6 746 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 OR10A6Q8NH74 314 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 CANT1Q8WVQ1 401 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 HAUS8Q9BT25 410 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 KLHL25Q9H0H3 589 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 BRF2Q9HAW0 419 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 EXO1Q9UQ84 846 aaKnown RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 TMED5Q9Y3A6 229 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 SERTM1A2A2V5 107 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 OXTRP30559 389 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 TIA1P31483 386 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 SLC19A1P41440 591 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 SFSWAPQ12872 951 aaKnown RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 GLB1L3Q8NCI6 653 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 PNPT1Q8TCS8 783 aaKnown RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 FCRL1Q96LA6 429 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 LRGUKQ96M69 825 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 ANKRD27Q96NW4 1050 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 PAIP1Q9H074 479 aaKnown RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 AASDHPPTQ9NRN7 309 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 AURKCQ9UQB9 309 aa12.09□□□□□ -0.47
CLCN6-206ENST00000376496 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.09□□□□□ -0.47
CLCN6-206ENST00000376496 GABRR3A8MPY1 467 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 MYO1DO94832 1006 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 APBB3O95704 486 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 THEGLP0DJG4 465 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 HSD17B1P14061 328 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 CD6P30203 668 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 RGS19P49795 217 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 IRX1P78414 480 aaPredicted RBP12.08□□□□□ -0.48
CLCN6-206ENST00000376496 FOXM1Q08050 763 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 ARHGAP19Q14CB8 494 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 IZUMO2Q6UXV1 221 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 DGLUCYQ7Z3D6 616 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 TRIM73Q86UV7 250 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 GPR180Q86V85 440 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 REPS1Q96D71 796 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 FCRL4Q96PJ5 515 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 EHD1Q9H4M9 534 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 SLC6A20Q9NP91 592 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 SH3BP4Q9P0V3 963 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 IGHV1OR15-9A0A0B4J2B8 117 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 ISM1B1AKI9 464 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 KIR3DL1P43629 444 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 CCR8P51685 355 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 CASP9P55211 416 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 WNT3P56703 355 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 CSNK1G2P78368 415 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 PRSS53Q2L4Q9 553 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 ZNF385BQ569K4 471 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 WLSQ5T9L3 541 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 GPR153Q6NV75 609 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 AMIGO2Q86SJ2 522 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 PQLC1Q8N2U9 271 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 AMER3Q8N944 861 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 OR4K1Q8NGD4 311 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 LCN9Q8WX39 176 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 LRTOMTQ8WZ04 291 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 SPATA7Q9P0W8 599 aa12.08□□□□□ -0.48
CLCN6-206ENST00000376496 ANKDD1BA6NHY2 528 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 NPIPB8E9PQR5 432 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 PRAMEF26H0Y7S4 382 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 TIPRLO75663 272 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 DCNP07585 359 aaKnown RBP12.07□□□□□ -0.48
CLCN6-206ENST00000376496 ABCB1P08183 1280 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-206ENST00000376496 C7P10643 843 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 HSD3B1P14060 373 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 HRH2P25021 359 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 HSD3B2P26439 372 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 MLLT1Q03111 559 aaPredicted RBP12.07□□□□□ -0.48
CLCN6-206ENST00000376496 CYP4F3Q08477 520 aa12.07□□□□□ -0.48
CLCN6-206ENST00000376496 EIF2B5Q13144 721 aaKnown RBP12.07□□□□□ -0.48
CLCN6-206ENST00000376496 KRT78Q8N1N4 520 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms