RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OLFM1Q99784 485 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 MRPL9Q9BYD2 267 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 NUF2Q9BZD4 464 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 POLR1EQ9GZS1 481 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 VCX3BQ9H321 246 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 POMKQ9H5K3 350 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 CXorf36Q9H7Y0 433 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 EML4Q9HC35 981 aaKnown RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 ZBTB26Q9HCK0 441 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 NRIP3Q9NQ35 241 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 RNF186Q9NXI6 227 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 HACD3Q9P035 362 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 UXTQ9UBK9 157 aaPredicted RBP4.7□□□□□ -1.66
USP48-202ENST00000374730 STK39Q9UEW8 545 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 BCAP29Q9UHQ4 241 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 ZDHHC2Q9UIJ5 367 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 POMPQ9Y244 141 aa4.7□□□□□ -1.66
USP48-202ENST00000374730 LTBP2Q14767 1821 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 A0A1B0GVC2 190 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 A0A1W2PPL8 197 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 SLC38A8A6NNN8 435 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 F5H5T6 163 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 H3BNX3 289 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 PPP6CO00743 305 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 FRS3O43559 492 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 KIF1CO43896 1103 aaKnown RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 ACSL4O60488 711 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 RPP40O75818 363 aaKnown RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 PDE5AO76074 875 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 NDST3O95803 873 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 KELP23276 732 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 HOXD9P28356 352 aaPredicted RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 HOXD10P28358 340 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 EPHA3P29320 983 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 CCR10P46092 362 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 PSMD8P48556 350 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 SLC11A1P49279 550 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 NUDT2P50583 147 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 ATP4BP51164 291 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 DGKEP52429 567 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 MAXP61244 160 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 NAA20P61599 178 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 PRAMEP78395 509 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 IRX1P78414 480 aaPredicted RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 SULT2A1Q06520 285 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 CDC16Q13042 620 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 BFSP2Q13515 415 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 CYLC2Q14093 348 aaPredicted RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 PTK2BQ14289 1009 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 CSHL1Q14406 222 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 SQLEQ14534 574 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 ZNF235Q14590 738 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 MAPRE2Q15555 327 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 ZNF789Q5FWF6 425 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 PIGGQ5H8A4 983 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 C10orf120Q5SQS8 335 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 SDHAF4Q5VUM1 108 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 MORN5Q5VZ52 161 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 NADSYN1Q6IA69 706 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 MRNIPQ6NTE8 343 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 ZFP1Q6P2D0 407 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 FUT10Q6P4F1 479 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 IZUMO2Q6UXV1 221 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 CHST9Q7L1S5 443 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 KBTBD6Q86V97 674 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 TMEM126BQ8IUX1 230 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 MFN1Q8IWA4 741 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 DSELQ8IZU8 1212 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 BBS5Q8N3I7 341 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 ATAD1Q8NBU5 361 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 ABHD11Q8NFV4 315 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 CEP70Q8NHQ1 597 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 BRSK1Q8TDC3 778 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 OSCP1Q8WVF1 389 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 PPP2R3CQ969Q6 453 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 PABPC5Q96DU9 382 aaKnown RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 PPM1MQ96MI6 270 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 RPRD1AQ96P16 312 aaPredicted RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 CASD1Q96PB1 797 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 KLHL5Q96PQ7 755 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 LENG8Q96PV6 779 aaPredicted RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 ASB2Q96Q27 587 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 TRIB3Q96RU7 358 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 NDNQ99608 321 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 SEMA3CQ99985 751 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 ECSITQ9BQ95 431 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 MGME1Q9BQP7 344 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 THAP7Q9BT49 309 aaPredicted RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 CRB3Q9BUF7 120 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 MAGEH1Q9H213 219 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 WDR55Q9H6Y2 383 aaPredicted RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 MEAF6Q9HAF1 191 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 STARD7Q9NQZ5 370 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 RASSF1Q9NS23 344 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 INTS10Q9NVR2 710 aaKnown RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 SAGE1Q9NXZ1 904 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 UTP6Q9NYH9 597 aaKnown RBP4.69□□□□□ -1.66
USP48-202ENST00000374730 GTSE1Q9NYZ3 720 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 SARDHQ9UL12 918 aa4.69□□□□□ -1.66
USP48-202ENST00000374730 PSMD13Q9UNM6 376 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms