RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 NDUFAF4Q9P032 175 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 DNAJB4Q9UDY4 337 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 FAM198AQ9UFP1 575 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 ARHGAP23Q9P227 1491 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 OTOL1A6NHN0 477 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-202ENST00000369984 CENPBD1B2RD01 187 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 KLK1P06870 262 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 GSTM3P21266 225 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 SP2Q02086 613 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 ADGRD2Q7Z7M1 963 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 FCAMRQ8WWV6 532 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 HSPBAP1Q96EW2 488 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 COL21A1Q96P44 957 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 CD180Q99467 661 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 C7orf50Q9BRJ6 194 aaKnown RBP12.13□□□□□ -0.47
HCFC1-202ENST00000369984 EIF5A2Q9GZV4 153 aaKnown RBP12.13□□□□□ -0.47
HCFC1-202ENST00000369984 L1CAMP32004 1257 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 PCBP2Q15366 365 aaKnown RBP eCLIP12.13□□□□□ -0.471e-8■■■■□ 23.5
HCFC1-202ENST00000369984 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-202ENST00000369984 PYURFQ96I23 114 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 PCDHGB6Q9Y5F9 930 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 CH25HO95992 272 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 C8BP07358 591 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 GNB3P16520 340 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 CD72P21854 359 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 EEF1DP3Q658K8 133 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 VITQ6UXI7 678 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 TAS2R10Q9NYW0 307 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 MAB21L2Q9Y586 359 aa12.13□□□□□ -0.47
HCFC1-202ENST00000369984 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
HCFC1-202ENST00000369984 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 FARS2O95363 451 aaKnown RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ZSCAN1Q8NBB4 408 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 DPEP3Q9H4B8 488 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 IL36AQ9UHA7 158 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 UBQLN2Q9UHD9 624 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ADGRB2O60241 1585 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 FCER2P06734 321 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 DSC3Q14574 896 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 SEC23BQ15437 767 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 CPT1CQ8TCG5 803 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 NUS1Q96E22 293 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 TMEM80Q96HE8 168 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 GTPBP2Q9BX10 602 aaKnown RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 USP29Q9HBJ7 922 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 AP1M2Q9Y6Q5 423 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 NAV1Q8NEY1 1877 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 TMEM150CB9EJG8 249 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 DISC1C4P0D8 188 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 CDC7O00311 574 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 PDYNP01213 254 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 F8A1P23610 371 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 SP3Q02447 781 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ELOAQ14241 798 aaKnown RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 UGT8Q16880 541 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 NIPAL1Q6NVV3 410 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 NFKBIDQ8NI38 313 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 SEC14L4Q9UDX3 406 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 PEAK1Q9H792 1746 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 INMTO95050 263 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ITGB5P18084 799 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 NRLP54845 237 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 LRRN1Q6UXK5 716 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 CEACAM20Q6UY09 585 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 MBOAT1Q6ZNC8 495 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 P4HA3Q7Z4N8 544 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 DQX1Q8TE96 717 aaKnown RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 HERVK_113Q902F9 699 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 TXN2Q99757 166 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 UTS2RQ9UKP6 389 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 PEX14O75381 377 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 CASRP41180 1078 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 PTGIRP43119 386 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ABHD15Q6UXT9 468 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 RAB11FIP5Q9BXF6 653 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 TFB2MQ9H5Q4 396 aaKnown RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 HSPB11Q9Y547 144 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 A0A1B0GVT2 93 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 SULT1B1O43704 296 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 AMZ1Q400G9 498 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 IKZF4Q9H2S9 585 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 OXSMQ9NWU1 459 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 TEX13DA0A0J9YY54 714 aaPredicted RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 HSPA12AO43301 675 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ITM2AO43736 263 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 IMPDH1P20839 514 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 HCAR3P49019 387 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 CDH15P55291 814 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 HERV-K104P61576 105 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 SCGB1C1Q8TD33 95 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 AURKBQ96GD4 344 aaPredicted RBP12.12□□□□□ -0.47
HCFC1-202ENST00000369984 PDZD7Q9H5P4 517 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 ABCB8Q9NUT2 735 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 SCP2D1Q9UJQ7 156 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 SH2B3Q9UQQ2 575 aa12.12□□□□□ -0.47
HCFC1-202ENST00000369984 OR6C6A6NF89 314 aa12.11□□□□□ -0.47
HCFC1-202ENST00000369984 AQP12BA6NM10 295 aa12.11□□□□□ -0.47
HCFC1-202ENST00000369984 A8MV72 311 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms