RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	RGS4	P49798	205 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	CLCN7	P51798	805 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	KCNK10	P57789	538 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	RPS15A	P62244	130 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	YBX1	P67809	324 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	MAT1A	Q00266	395 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	TAP2	Q03519	686 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	SYT16	Q17RD7	645 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	BTBD16	Q32M84	506 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	CENPU	Q71F23	418 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	PLD3	Q8IV08	490 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	LMNTD2	Q8IXW0	634 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	SRRM1	Q8IYB3	904 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	AMER3	Q8N944	861 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	PRELID2	Q8N945	189 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	CAMKV	Q8NCB2	501 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	FBXO15	Q8NCQ5	510 aa	Predicted RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	ALKBH8	Q96BT7	664 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	MESP1	Q9BRJ9	268 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	TRIM56	Q9BRZ2	755 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	FAM167B	Q9BTA0	163 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZNF700	Q9H0M5	742 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	PCBD2	Q9H0N5	130 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	ANKH	Q9HCJ1	492 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	STMN3	Q9NZ72	180 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	GALP	Q9UBC7	116 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	SEC14L3	Q9UDX4	400 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	TRMT6	Q9UJA5	497 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	ENTPD4	Q9Y227	616 aa		13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	SPTBN1	Q01082	2364 aa	Known RBP	13.93	□□□□□ -0.18
TARDBP-231	ENST00000639599	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	OR5H15	A6NDH6	313 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599		H0YIG0	161 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	GOLGA8M	H3BSY2	632 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599		H7BY64	318 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	UNC5C	O95185	931 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	CYC1	P08574	325 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	ITGAM	P11215	1152 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	MLN	P12872	115 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	SKP1	P63208	163 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	RELA	Q04206	551 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	CTBP1	Q13363	440 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	PTK6	Q13882	451 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.92	□□□□□ -0.18	3e-6	■■■■□ 22.6
TARDBP-231	ENST00000639599	ZNF425	Q6IV72	752 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	DENND6A	Q8IWF6	608 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZC3H7A	Q8IWR0	971 aa	Known RBP	13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	CPNE9	Q8IYJ1	553 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	TBC1D19	Q8N5T2	526 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	OR9A4	Q8NGU2	314 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	DNAJB8	Q8NHS0	232 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZCCHC10	Q8TBK6	192 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	MAGOHB	Q96A72	148 aa	Known RBP	13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	THAP11	Q96EK4	314 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	PRAP1	Q96NZ9	151 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	NAP1L3	Q99457	506 aa	Predicted RBP	13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	GPR21	Q99679	349 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	RNF32	Q9H0A6	362 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	TMEM184C	Q9NVA4	438 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	SH3BGRL2	Q9UJC5	107 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	SEC16A	O15027	2179 aa		13.92	□□□□□ -0.18
TARDBP-231	ENST00000639599	SPTAN1	Q13813	2472 aa	Known RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	USP9X	Q93008	2570 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	LOC102723996	A0A087X1L8	192 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	IGKV1-8	A0A0C4DH67	115 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	P2RX6	O15547	441 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	FOXS1	O43638	330 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	KIF5C	O60282	957 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	PRAMEF2	O60811	474 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	SEC24D	O94855	1032 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	NSA2	O95478	260 aa	Known RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	STATH	P02808	62 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	CELA2A	P08217	269 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	SLC35G6	P0C7Q6	338 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	ESRRA	P11474	423 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	HIST1H2AD	P20671	130 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	TNFRSF8	P28908	595 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	SLC1A2	P43004	574 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	AGTR2	P50052	363 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	TAS2R50	P59544	299 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	TBPL1	P62380	186 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	ACTN3	Q08043	901 aa	Predicted RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	PCOLCE	Q15113	449 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	CPEB2	Q7Z5Q1	589 aa	Known RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	C17orf64	Q86WR6	236 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	GAS2L3	Q86XJ1	694 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	MYO1H	Q8N1T3	1032 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	FAM98A	Q8NCA5	519 aa	Known RBP	13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	ASB11	Q8WXH4	323 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	MAGED4	Q96JG8	741 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	HIST1H2AH	Q96KK5	128 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	ZNF354B	Q96LW1	612 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	CCDC138	Q96M89	665 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	HIST1H2AJ	Q99878	128 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	H2AFJ	Q9BTM1	129 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	KCNK13	Q9HB14	408 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	HCN3	Q9P1Z3	774 aa		13.91	□□□□□ -0.18
TARDBP-231	ENST00000639599	DHRS7	Q9Y394	339 aa		13.91	□□□□□ -0.18

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