RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 TSPAN10Q9H1Z9 355 aaPredicted RBP12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 ENAMQ9NRM1 1142 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 HCN3Q9P1Z3 774 aa12.66□□□□□ -0.38
HMGB1P24-201ENST00000611897 TCRBV7S3A2A0A539 114 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZNF839A8K0R7 811 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 MYO1CO00159 1063 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 AP3B1O00203 1094 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 PRAMEF2O60811 474 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 PSIP1O75475 530 aaKnown RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ERGP11308 486 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 EZRP15311 586 aaKnown RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 IL1RNP18510 177 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 PAMP19021 973 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 HTR1EP28566 365 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 SLC26A3P40879 764 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 AVPR1BP47901 424 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 EFNA3P52797 238 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 CASP6P55212 293 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 SNRPNP63162 240 aaKnown RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 PRDX1Q06830 199 aaKnown RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 GBX1Q14549 363 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 NDUFA9Q16795 377 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 LONRF1Q17RB8 773 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 TTLL9Q3SXZ7 439 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 GARNL3Q5VVW2 1013 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZNF470Q6ECI4 717 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZNF425Q6IV72 752 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 PRSS41Q7RTY9 318 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 REXO1L1PQ8IX06 675 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZNF480Q8WV37 535 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 RELTQ969Z4 430 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZNF669Q96BR6 464 aaPredicted RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ALKBH8Q96BT7 664 aaKnown RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 OR2A5Q96R48 311 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 SLC30A3Q99726 388 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 MACROD1Q9BQ69 325 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 KIFC1Q9BW19 673 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 VN1R1Q9GZP7 353 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ZNF700Q9H0M5 742 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 CCDC68Q9H2F9 335 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 KLHL1Q9NR64 748 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 FBXO6Q9NRD1 293 aaPredicted RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 ANKRD10Q9NXR5 420 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 SAMD15Q9P1V8 674 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 TEKT2Q9UIF3 430 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 SOX13Q9UN79 622 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 DRG1Q9Y295 367 aaKnown RBP12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 C2CD3Q4AC94 2353 aa12.65□□□□□ -0.38
HMGB1P24-201ENST00000611897 FBN2P35556 2912 aa12.65□□□□□ -0.39
HMGB1P24-201ENST00000611897 OTOGQ6ZRI0 2925 aa12.65□□□□□ -0.39
HMGB1P24-201ENST00000611897 OR2W5A6NFC9 320 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 H7BY64 318 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 AVILO75366 819 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 FGGP02679 453 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 ESRRAP11474 423 aaPredicted RBP12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 COX6B1P14854 86 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 OGNP20774 298 aaKnown RBP12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 EMP3P54852 163 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 AP2B1P63010 937 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 ARHGAP19Q14CB8 494 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 SIX1Q15475 284 aaPredicted RBP12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 CCNG2Q16589 344 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 ZNF766Q5HY98 468 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 MEI1Q5TIA1 1274 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 KIAA0930Q6ICG6 404 aaPredicted RBP12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 NEPROQ6NW34 567 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 CENPUQ71F23 418 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 GDF7Q7Z4P5 450 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 SHISA5Q8N114 240 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 BEST3Q8N1M1 668 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 RNF10Q8N5U6 811 aaKnown RBP12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 GIMAP7Q8NHV1 300 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 MAGED4Q96JG8 741 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 PRAP1Q96NZ9 151 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 TUBB6Q9BUF5 446 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 TSGA10Q9BZW7 698 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 KCNK13Q9HB14 408 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 STMN3Q9NZ72 180 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 ABI3Q9P2A4 366 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 TINAGQ9UJW2 476 aa12.64□□□□□ -0.39
HMGB1P24-201ENST00000611897 LOC102723996A0A087X1L8 192 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 ZNF860A6NHJ4 632 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 E7ENX8 843 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 TXNDC9O14530 226 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 CDC123O75794 336 aaPredicted RBP12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 MYBL2P10244 700 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 ICAM2P13598 275 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 HSD17B2P37059 387 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 CA7P43166 264 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 XCR1P46094 333 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 TBPL1P62380 186 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 ABATP80404 500 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 TAP2Q03519 686 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 ART3Q13508 389 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 THOC5Q13769 683 aaKnown RBP12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 DHX34Q14147 1143 aaKnown RBP12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 ZXDCQ2QGD7 858 aaPredicted RBP12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 C4orf22Q6V702 233 aa12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 PIWIL4Q7Z3Z4 852 aaKnown RBP12.63□□□□□ -0.39
HMGB1P24-201ENST00000611897 CPEB2Q7Z5Q1 589 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms