RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 VSX2P58304 361 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 RBBP5Q15291 538 aaKnown RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 ZIC1Q15915 447 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 RBBP7Q16576 425 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 METTL2BQ6P1Q9 378 aaKnown RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 PPP1R14CQ8TAE6 165 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 UBTD2Q8WUN7 234 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 SLC39A7Q92504 469 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 NEIL2Q969S2 332 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 FCRL4Q96PJ5 515 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 TMEM79Q9BSE2 394 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 B3GNT4Q9C0J1 378 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 DRC3Q9H069 523 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 ACTR8Q9H981 624 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 CUEDC1Q9NWM3 386 aaPredicted RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 SIDT1Q9NXL6 827 aaKnown RBP13.29□□□□□ -0.28
TRAF4-215ENST00000584944 NDOR1Q9UHB4 597 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 PCDHGA7Q9Y5G6 932 aa13.29□□□□□ -0.28
TRAF4-215ENST00000584944 PMS2P1A4D2B8 440 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 OR2A25A4D2G3 310 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 STMND1H3BQB6 276 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 HAT1O14929 419 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 TAPBPO15533 448 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 ZSCAN9O15535 394 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-215ENST00000584944 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
TRAF4-215ENST00000584944 PRB1P04280 392 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 KLK3P07288 261 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-215ENST00000584944 MSL3P1P0C860 447 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 FGF5P12034 268 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 ETV5P41161 510 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 ATP1A2P50993 1020 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 CCNG1P51959 295 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 PCBP4P57723 403 aaKnown RBP13.28□□□□□ -0.28
TRAF4-215ENST00000584944 TLE3Q04726 772 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 SLC18A2Q05940 514 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 LAPTM5Q13571 262 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 GTF2H2Q13888 395 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 GRM7Q14831 915 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 FCRL6Q6DN72 434 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 GTF2H2CQ6P1K8 395 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 TLDC1Q6P9B6 456 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 NXPE4Q6UWF7 544 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 CCNYL1Q8N7R7 359 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 LSM14AQ8ND56 463 aaKnown RBP13.28□□□□□ -0.28
TRAF4-215ENST00000584944 CCT6BQ92526 530 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 UBE2E3Q969T4 207 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 THAP11Q96EK4 314 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 EFCAB11Q9BUY7 163 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 ACTR5Q9H9F9 607 aaPredicted RBP13.28□□□□□ -0.28
TRAF4-215ENST00000584944 APMAPQ9HDC9 416 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 FAM60AQ9NP50 221 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 SRPK3Q9UPE1 567 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 PCDHGA3Q9Y5H0 932 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 KLK4Q9Y5K2 254 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 B3GALT1Q9Y5Z6 326 aa13.28□□□□□ -0.28
TRAF4-215ENST00000584944 A8MT66 165 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 PLIN3O60664 434 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 CRCPO75575 148 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 C1QL1O75973 258 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 DXOO77932 396 aaKnown RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 STK17BO94768 372 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 KIAA0754O94854 1291 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 SUPT7LO94864 414 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 SLC35G6P0C7Q6 338 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ATXN8OSP0DMR3 200 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 C1GALT1C1LP0DN25 315 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 MTHFD2P13995 350 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 AGXTP21549 392 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ALAS2P22557 587 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 HPDP32754 393 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ARSFP54793 590 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 NAA20P61599 178 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 HERVK_113P63132 956 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 PHEXP78562 749 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 MEF2AQ02078 507 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 RELAQ04206 551 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 RGS1Q08116 209 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 CHIT1Q13231 466 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 SLBPQ14493 270 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 PCBP2Q15366 365 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 NDUFA9Q16795 377 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 FAM214AQ32MH5 1076 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 WASHC2DQ5SRD0 308 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 CATSPEREQ5SY80 951 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 TTC19Q6DKK2 380 aaPredicted RBP13.27□□□□□ -0.29
TRAF4-215ENST00000584944 IGF2-ASQ6U949 168 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ZYG11AQ6WRX3 759 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 PAQR7Q86WK9 346 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 PLD3Q8IV08 490 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 SPACA3Q8IXA5 215 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 DNAJC22Q8N4W6 341 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 CSNK1A1LQ8N752 337 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 BMPERQ8N8U9 685 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 BANPQ8N9N5 519 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 CAMKVQ8NCB2 501 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 ABHD11Q8NFV4 315 aa13.27□□□□□ -0.29
TRAF4-215ENST00000584944 TTLQ8NG68 377 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms