RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TMEM92Q6UXU6 159 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 TRIM73Q86UV7 250 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 KIAA2013Q8IYS2 634 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 OR52E1Q8NGJ3 308 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ZBED6CLQ96FA7 236 aaPredicted RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 RNF145Q96MT1 663 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 VPS35Q96QK1 796 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 S1PR5Q9H228 398 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 GIMAP2Q9UG22 337 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 CORO2BQ9UQ03 480 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 hCG_2014768A0A024R1R8 64 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 MATN2O00339 956 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 B4GALT2O60909 372 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 KRT36O76013 467 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 PRPS1L1P21108 318 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 BNIP1Q12981 228 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 MTAPQ13126 283 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 DYNC1I2Q13409 638 aaKnown RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 KPNB1Q14974 876 aaKnown RBP9.77□□□□□ -0.85
SMG6-213ENST00000573166 TBCELQ5QJ74 424 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 GALNT7Q86SF2 657 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 SYVN1Q86TM6 617 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 EID2Q8N6I1 236 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 FBXO30Q8TB52 745 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 LKAAEAR1Q8TD35 194 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 RHBDF1Q96CC6 855 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ECHDC3Q96DC8 303 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 DUSP26Q9BV47 211 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 TM7SF3Q9NS93 570 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 LRIT1Q9P2V4 623 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 SERGEFQ9UGK8 458 aa9.77□□□□□ -0.85
SMG6-213ENST00000573166 ANKRD12Q6UB98 2062 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 MYO10Q9HD67 2058 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 TRPM6Q9BX84 2022 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 SEC16AO15027 2179 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 TPRP12270 2363 aaKnown RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 FEZF1A0PJY2 475 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 BBIP1A8MTZ0 92 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 PLRG1O43660 514 aaKnown RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 MTHFD1P11586 935 aaKnown RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 SERPINB1P30740 379 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 TOMM20Q15388 145 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 NXPE4Q6UWF7 544 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 NEK10Q6ZWH5 1172 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 MFSD2AQ8NA29 543 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 GLB1L3Q8NCI6 653 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 CATSPER1Q8NEC5 780 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ASB11Q8WXH4 323 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ABTB1Q969K4 478 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 MMABQ96EY8 250 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 INSM2Q96T92 566 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 EXD2Q9NVH0 621 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 MYOFQ9NZM1 2061 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 PDPK1O15530 556 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 NDUFB5O43674 189 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 MAGP20916 626 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 SLC6A2P23975 617 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ARNTP27540 789 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 DEFB134Q4QY38 66 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ASPGQ86U10 573 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 LILRA3Q8N6C8 439 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 METTL27Q8N6F8 245 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 FAM13CQ8NE31 585 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 RNF31Q96EP0 1072 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 PLEKHA8Q96JA3 519 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 GAL3ST4Q96RP7 486 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 GFM1Q96RP9 751 aaKnown RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 DHRS4Q9BTZ2 278 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ADAP2Q9NPF8 381 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 TRPS1Q9UHF7 1281 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ANGPT4Q9Y264 503 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 A0A1W2PPC4 97 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 TTC36A6NLP5 189 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 K7EQS6 105 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 SLC28A2O43868 658 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 OR2B3O76000 313 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 JUPP14923 745 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 CSNK2A2P19784 350 aaPredicted RBP9.76□□□□□ -0.85
SMG6-213ENST00000573166 IGFALSP35858 605 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 CCR5P51681 352 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 TAS2R50P59544 299 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 DPTQ07507 201 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 RPE65Q16518 533 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 DPY19L1Q2PZI1 675 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 NAT6Q93015 286 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 NRBF2Q96F24 287 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 COQ10AQ96MF6 247 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ZNF570Q96NI8 536 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 KCNH6Q9H252 994 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ADAMTS6Q9UKP5 1117 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 ENTPD2Q9Y5L3 495 aa9.76□□□□□ -0.85
SMG6-213ENST00000573166 A8MUA0 341 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 IL6P05231 212 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 RRM2P31350 389 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 MPIP34949 423 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 LTBRP36941 435 aa9.75□□□□□ -0.85
SMG6-213ENST00000573166 PTDSS1P48651 473 aaKnown RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 MAZP56270 477 aaKnown RBP9.75□□□□□ -0.85
SMG6-213ENST00000573166 PRR5P85299 388 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms