RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PRAMEF2O60811 474 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 VPS26AO75436 327 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 CYC1P08574 325 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 ERVK-10P10266 1014 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 IMPA1P29218 277 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 NPY2RP49146 381 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 TIAL1Q01085 375 aaKnown RBP eCLIP11.88□□□□□ -0.51
COPS7A-221ENST00000546229 ANKRD20A4Q4UJ75 823 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 ANKRD22Q5VYY1 191 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 CYHR1Q6ZMK1 362 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 CAND1Q86VP6 1230 aaKnown RBP11.88□□□□□ -0.51
COPS7A-221ENST00000546229 GAS2L3Q86XJ1 694 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 RAB42Q8N4Z0 105 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 ACBD4Q8NC06 268 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 MDS2Q8NDY4 140 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 SKA2Q8WVK7 121 aaPredicted RBP11.88□□□□□ -0.51
COPS7A-221ENST00000546229 ASB11Q8WXH4 323 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 MMABQ96EY8 250 aaPredicted RBP11.88□□□□□ -0.51
COPS7A-221ENST00000546229 MAGEB10Q96LZ2 347 aaPredicted RBP11.88□□□□□ -0.51
COPS7A-221ENST00000546229 FOPNLQ96NB1 174 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 TCF12Q99081 682 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 KLHL42Q9P2K6 505 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 PCYOX1Q9UHG3 505 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 CDC14AQ9UNH5 594 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 DRG1Q9Y295 367 aaKnown RBP11.88□□□□□ -0.51
COPS7A-221ENST00000546229 CRYL1Q9Y2S2 319 aa11.88□□□□□ -0.51
COPS7A-221ENST00000546229 C2CD3Q4AC94 2353 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 IGHV3-20A0A0C4DH32 117 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 ZCWPW2A0A1B0GU75 182 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 MAN1A2O60476 641 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 AVILO75366 819 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 UNC5CO95185 931 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 NSA2O95478 260 aaKnown RBP11.87□□□□□ -0.51
COPS7A-221ENST00000546229 HEXBP07686 556 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 PKMP14618 531 aaKnown RBP11.87□□□□□ -0.51
COPS7A-221ENST00000546229 RPA3P35244 121 aaPredicted RBP11.87□□□□□ -0.51
COPS7A-221ENST00000546229 MAGEA3P43357 314 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 KCNJ1P48048 391 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 BASP1P80723 227 aaKnown RBP11.87□□□□□ -0.51
COPS7A-221ENST00000546229 CDK16Q00536 496 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF630Q2M218 657 aaPredicted RBP11.87□□□□□ -0.51
COPS7A-221ENST00000546229 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 PLAG1Q6DJT9 500 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 MRNIPQ6NTE8 343 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 TMEM214Q6NUQ4 689 aaKnown RBP11.87□□□□□ -0.51
COPS7A-221ENST00000546229 GFRALQ6UXV0 394 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 PCGF5Q86SE9 256 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 PDSS2Q86YH6 399 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 SIAH3Q8IW03 269 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF295-AS1Q8N0V1 137 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF808Q8N4W9 903 aaPredicted RBP11.87□□□□□ -0.51
COPS7A-221ENST00000546229 OR9A4Q8NGU2 314 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 DNAJB8Q8NHS0 232 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 GSDMBQ8TAX9 411 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 CD200R1Q8TD46 325 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 TM4SF19Q96DZ7 209 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 TUBB6Q9BUF5 446 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 BFARQ9NZS9 450 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 MKL2Q9ULH7 1088 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 ZNF835Q9Y2P0 537 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 PCDHGB6Q9Y5F9 930 aa11.87□□□□□ -0.51
COPS7A-221ENST00000546229 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.86□□□□□ -0.51
COPS7A-221ENST00000546229 KCNE1BA0A087WTH5 132 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 ASPDHA6ND91 283 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 OR2W5A6NFC9 320 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 H0YIG0 161 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 SMAPO00193 183 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 SEC24DO94855 1032 aaPredicted RBP11.86□□□□□ -0.51
COPS7A-221ENST00000546229 RASAL1O95294 804 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 STATHP02808 62 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 CATP04040 527 aaKnown RBP11.86□□□□□ -0.51
COPS7A-221ENST00000546229 C8orf89P0DMQ9 161 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 PTGER4P35408 488 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 ABATP80404 500 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 CUL1Q13616 776 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 ZXDCQ2QGD7 858 aaPredicted RBP11.86□□□□□ -0.51
COPS7A-221ENST00000546229 C4orf22Q6V702 233 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 Q6ZPB1 254 aaPredicted RBP11.86□□□□□ -0.51
COPS7A-221ENST00000546229 DENND6AQ8IWF6 608 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 PRELID2Q8N945 189 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 KCNJ9Q92806 393 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 SCMH1Q96GD3 660 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 CCDC138Q96M89 665 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 FRMD6Q96NE9 622 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 SIGLEC12Q96PQ1 595 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 HES7Q9BYE0 225 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 FAM114A2Q9NRY5 505 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 LANCL2Q9NS86 450 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 INTS10Q9NVR2 710 aaKnown RBP11.86□□□□□ -0.51
COPS7A-221ENST00000546229 ZKSCAN5Q9Y2L8 839 aa11.86□□□□□ -0.51
COPS7A-221ENST00000546229 C19orf84I3L1E1 186 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 AP3B1O00203 1094 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 SLC19A2O60779 497 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 CCNDBP1O95273 360 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 MPC1LP0DKB6 136 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 CXCR2P25025 360 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 CDC25BP30305 580 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 HSD17B2P37059 387 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 TBPL1P62380 186 aa11.85□□□□□ -0.51
COPS7A-221ENST00000546229 RHAGQ02094 409 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms