RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 CACUL1Q86Y37 369 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 GALNT13Q8IUC8 556 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 CPOQ8IVL8 374 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 CEP97Q8IW35 865 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 PIANPQ8IYJ0 282 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 TMEFF1Q8IYR6 380 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 LRRC34Q8IZ02 419 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 CCDC63Q8NA47 563 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 PCYOX1LQ8NBM8 494 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 CSGALNACT1Q8TDX6 532 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 NAT14Q8WUY8 206 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 CKAP2Q8WWK9 683 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 SUSD6Q92537 303 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 ECHDC3Q96DC8 303 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 RADILQ96JH8 1075 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 CCT8L2Q96SF2 557 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 ACOX2Q99424 681 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 GPR22Q99680 433 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 OLFM1Q99784 485 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 MECRQ9BV79 373 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 TRMT61BQ9BVS5 477 aaKnown RBP4.08□□□□□ -1.76
CD44-226ENST00000527889 CPEB1Q9BZB8 566 aaKnown RBP4.08□□□□□ -1.76
CD44-226ENST00000527889 CCDC68Q9H2F9 335 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 BRD9Q9H8M2 597 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 MAGEE1Q9HCI5 957 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 FBRSL1Q9HCM7 1045 aaKnown RBP4.08□□□□□ -1.76
CD44-226ENST00000527889 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.08□□□□□ -1.76
CD44-226ENST00000527889 TBC1D23Q9NUY8 699 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 FGFR1OP2Q9NVK5 253 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 HACD3Q9P035 362 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 IL17CQ9P0M4 197 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 IL36AQ9UHA7 158 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 SARDHQ9UL12 918 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 EMCNQ9ULC0 261 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 RIMKLBQ9ULI2 386 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 SUFUQ9UMX1 484 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 RUVBL1Q9Y265 456 aaKnown RBP4.08□□□□□ -1.76
CD44-226ENST00000527889 SLC27A6Q9Y2P4 619 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 PLLPQ9Y342 182 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 PKP3Q9Y446 797 aa4.08□□□□□ -1.76
CD44-226ENST00000527889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.08□□□□□ -1.76
CD44-226ENST00000527889 KNTC1P50748 2209 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 A0A087WWL8 130 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 EDDM13A0A1B0GTR0 161 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CXorf51AA0A1B0GTR3 108 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 GMNCA6NCL1 334 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 C16orf96A6NNT2 1141 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 ANHXE9PGG2 379 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 TM9SF1O15321 606 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 MBTPS2O43462 519 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 OR1I1O60431 355 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 PLIN3O60664 434 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 GLRA3O75311 464 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 NIPSNAP2O75323 286 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 NDUFS3O75489 264 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 DNAJB5O75953 348 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 RHOBTB1O94844 696 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 TGDSO95455 350 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 C2P06681 752 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 VIMP08670 466 aaKnown RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 SLC35E2BP0CK96 405 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CYP2A6P11509 494 aaPredicted RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 ALOX15P16050 662 aaPredicted RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 ITGB6P18564 788 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 UGT1A6P19224 532 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 TAC1P20366 129 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 OGNP20774 298 aaKnown RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 UGT1A1P22309 533 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 UGT1A4P22310 534 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 LHCGRP22888 699 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 PSMA4P25789 261 aaKnown RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 FMO4P31512 558 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 VIPR1P32241 457 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 UGT1A3P35503 534 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 UGT1A5P35504 534 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 HMGCLP35914 325 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 MC3RP41968 323 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 ETV4P43268 484 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 ASMTP46597 345 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 LEPRP48357 1165 aaKnown RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 PSMD8P48556 350 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CENPAP49450 140 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CLCN5P51795 746 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 STC1P52823 247 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 SLC18A1P54219 525 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 SLC12A2P55011 1212 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CDKN2DP55273 166 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 RPL26P61254 145 aaKnown RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 XIAPP98170 497 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 TIAL1Q01085 375 aaKnown RBP eCLIP4.07□□□□□ -1.76
CD44-226ENST00000527889 IL9RQ01113 521 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CACNG1Q06432 222 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 DNAJC3Q13217 504 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 SP140Q13342 867 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 SMAD4Q13485 552 aaKnown RBP4.07□□□□□ -1.76
CD44-226ENST00000527889 ARHGEF7Q14155 803 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 EFR3AQ14156 821 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CSHL1Q14406 222 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 PON2Q15165 354 aa4.07□□□□□ -1.76
CD44-226ENST00000527889 CHRNA6Q15825 494 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms