RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CORO1CQ9ULV4 474 aaPredicted RBP12.93□□□□□ -0.34
CCHCR1-227ENST00000508852 MRPS2Q9Y399 296 aaKnown RBP12.93□□□□□ -0.34
CCHCR1-227ENST00000508852 NEU2Q9Y3R4 380 aa12.93□□□□□ -0.34
CCHCR1-227ENST00000508852 LOC102723996A0A087X1L8 192 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 TRAV17A0A0B4J275 112 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 IGKV1-8A0A0C4DH67 115 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 GOLGA8MH3BSY2 632 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 UTP20O75691 2785 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 IL10P22301 178 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 ARG2P78540 354 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 ILF2Q12905 390 aaKnown RBP12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 HIF1AQ16665 826 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 HSP90AA5PQ58FG0 334 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 VWA2Q5GFL6 755 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 SPANXN3Q5MJ09 141 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 MAMDC2Q7Z304 686 aaPredicted RBP12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 MYO1HQ8N1T3 1032 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 BCORP1Q8N888 145 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 GPATCH11Q8N954 259 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 CAMKVQ8NCB2 501 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 C2CD4AQ8NCU7 369 aaPredicted RBP12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 SUN3Q8TAQ9 357 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 CD200R1Q8TD46 325 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 FAR1Q8WVX9 515 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 HAS2Q92819 552 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 CNDP1Q96KN2 507 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 HAUS8Q9BT25 410 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 TUBB6Q9BUF5 446 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 TRIM54Q9BYV2 358 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 RNF32Q9H0A6 362 aa12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 ZBTB20Q9HC78 741 aaPredicted RBP12.92□□□□□ -0.34
CCHCR1-227ENST00000508852 IGHV1-45A0A0A0MS14 117 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 CDK2AP1O14519 115 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 HAUS5O94927 633 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 MED26O95402 600 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 NSA2O95478 260 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 PRR35P0CG20 571 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 COX6A1P12074 109 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 IMPA1P29218 277 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 AP1S2P56377 157 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 FOXL2P58012 376 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 CUL1Q13616 776 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 HKDC1Q2TB90 917 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 ZNF549Q6P9A3 640 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 TMEM205Q6UW68 189 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 SYDE1Q6ZW31 735 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 C17orf64Q86WR6 236 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 LRRC56Q8IYG6 542 aaPredicted RBP12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 CPNE9Q8IYJ1 553 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 PRSS58Q8IYP2 241 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 PPFIBP2Q8ND30 876 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 GIMAP7Q8NHV1 300 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 ATL1Q8WXF7 558 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 SLCO2A1Q92959 643 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 MS4A14Q96JA4 679 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 OSBPL9Q96SU4 736 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 SLC30A3Q99726 388 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 TRIM56Q9BRZ2 755 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 ZNF700Q9H0M5 742 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 IARS2Q9NSE4 1012 aaKnown RBP12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 MED16Q9Y2X0 877 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 DOPEY1Q5JWR5 2465 aa12.91□□□□□ -0.34
CCHCR1-227ENST00000508852 A0A1B0GUH1 482 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 KRT87PA6NCN2 255 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 H7BY64 318 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 NDC80O14777 642 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 HAT1O14929 419 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 ALOX12BO75342 701 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 LDLRP01130 860 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 C8orf89P0DMQ9 161 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 TCP1P17987 556 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 SOX11P35716 441 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 AGTR2P50052 363 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 Q0VFX4 171 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 CRYMQ14894 314 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 RNASEH2BQ5TBB1 312 aaKnown RBP12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 CAPN13Q6MZZ7 669 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 LCTLQ6UWM7 567 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 LINC00696Q6ZRV3 163 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 CNTN4Q8IWV2 1026 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 SLC34A3Q8N130 599 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 PDIK1LQ8N165 341 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 ARHGEF39Q8N4T4 335 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 AMER3Q8N944 861 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 LRRC39Q96DD0 335 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 PRAP1Q96NZ9 151 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 ANKHQ9HCJ1 492 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 STOX2Q9P2F5 926 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 ASIC3Q9UHC3 531 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 ERRFI1Q9UJM3 462 aaPredicted RBP12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 MKL2Q9ULH7 1088 aa12.9□□□□□ -0.34
CCHCR1-227ENST00000508852 POLEQ07864 2286 aa12.9□□□□□ -0.35
CCHCR1-227ENST00000508852 A0A0A6YYC8 382 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-227ENST00000508852 I3L1I5 382 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-227ENST00000508852 MASP2O00187 686 aa12.89□□□□□ -0.35
CCHCR1-227ENST00000508852 DNALI1O14645 258 aaPredicted RBP12.89□□□□□ -0.35
CCHCR1-227ENST00000508852 FOXS1O43638 330 aa12.89□□□□□ -0.35
CCHCR1-227ENST00000508852 NRP2O60462 931 aa12.89□□□□□ -0.35
CCHCR1-227ENST00000508852 CRYABP02511 175 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms