RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 SH2B3Q9UQQ2 575 aa10.36□□□□□ -0.75
ATG4B-219ENST00000479941 TNPO3Q9Y5L0 923 aaKnown RBP10.36□□□□□ -0.75
ATG4B-219ENST00000479941 LOC105369274A0A096LPK9 316 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 LOC102723532A0A0G2JNH3 316 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CCDC151A5D8V7 595 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 H0YGG7 62 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 K7EPI3 171 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 MEN1O00255 615 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CCNT2O60583 730 aaKnown RBP10.35□□□□□ -0.75
ATG4B-219ENST00000479941 SMIM24O75264 130 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 EIF2S1P05198 315 aaKnown RBP10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CTSBP07858 339 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 PYGBP11216 843 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CXCR2P25025 360 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 RORAP35398 523 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 STAT5AP42229 794 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 GCGRP47871 477 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CCT5P48643 541 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 EMP3P54852 163 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 ARF3P61204 181 aaPredicted RBP10.35□□□□□ -0.75
ATG4B-219ENST00000479941 GPS2Q13227 327 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 SETDB1Q15047 1291 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 PDK4Q16654 411 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 PFKFB4Q16877 469 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 FBXO48Q5FWF7 155 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CATSPEREQ5SY80 951 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 ATG9BQ674R7 924 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 NXPE4Q6UWF7 544 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 ZNF517Q6ZMY9 492 aaPredicted RBP10.35□□□□□ -0.75
ATG4B-219ENST00000479941 PLD3Q8IV08 490 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 DSELQ8IZU8 1212 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 OR4N4Q8N0Y3 316 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CYP4X1Q8N118 509 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 ESAMQ96AP7 390 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 KIAA1143Q96AT1 154 aaPredicted RBP10.35□□□□□ -0.75
ATG4B-219ENST00000479941 AIF1LQ9BQI0 150 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 TMEM109Q9BVC6 243 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 NLNQ9BYT8 704 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 EHD1Q9H4M9 534 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 RRAGDQ9NQL2 400 aaPredicted RBP10.35□□□□□ -0.75
ATG4B-219ENST00000479941 TXLNGQ9NUQ3 528 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 WDR70Q9NW82 654 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 CPSF2Q9P2I0 782 aaKnown RBP10.35□□□□□ -0.75
ATG4B-219ENST00000479941 OPTCQ9UBM4 332 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 LGALS13Q9UHV8 139 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 PLAAQ9Y263 795 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 PTPRQQ9UMZ3 2332 aa10.35□□□□□ -0.75
ATG4B-219ENST00000479941 KMT2BQ9UMN6 2715 aaPredicted RBP10.34□□□□□ -0.75
ATG4B-219ENST00000479941 LOC101059948A0A1B0GTJ6 334 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 A0A1W2PPM1 405 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 TRBC2A0A5B9 178 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 FEZF1A0PJY2 475 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 HYKKA2RU49 373 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 C21orf140B9A014 251 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 STX16-NPEPL1H3BU86 382 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 GOLGA8RI6L899 631 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 TK2O00142 265 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 STX16O14662 325 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 CLGNO14967 610 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 LCMT2O60294 686 aaKnown RBP10.34□□□□□ -0.75
ATG4B-219ENST00000479941 GLRA3O75311 464 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 H2AFYO75367 372 aaKnown RBP10.34□□□□□ -0.75
ATG4B-219ENST00000479941 C1GALT1C1LP0DN25 315 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 EPB42P16452 691 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 TAC1P20366 129 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 AGXTP21549 392 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 ITPKBP27987 946 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 MEF2AQ02078 507 aaPredicted RBP10.34□□□□□ -0.75
ATG4B-219ENST00000479941 PCBP2Q15366 365 aaKnown RBP eCLIP10.34□□□□□ -0.75
ATG4B-219ENST00000479941 MUM1Q2TAK8 710 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 PRTGQ2VWP7 1150 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 GARNL3Q5VVW2 1013 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 CCDC81Q6ZN84 652 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 SLCO4C1Q6ZQN7 724 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 SH2D5Q6ZV89 423 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 TTLL10Q6ZVT0 673 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 TMPRSS11BQ86T26 416 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 TMEM151AQ8N4L1 468 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 CSNK1A1LQ8N752 337 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 SNX31Q8N9S9 440 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 MFSD9Q8NBP5 474 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 CAMKVQ8NCB2 501 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 MR1Q95460 341 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 RNF31Q96EP0 1072 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 GBP5Q96PP8 586 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 C17orf62Q9BQA9 187 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 PITHD1Q9GZP4 211 aaPredicted RBP10.34□□□□□ -0.75
ATG4B-219ENST00000479941 GPN2Q9H9Y4 310 aaPredicted RBP10.34□□□□□ -0.75
ATG4B-219ENST00000479941 STARD5Q9NSY2 213 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 CUTCQ9NTM9 273 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 TMEM216Q9P0N5 145 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 KCND3Q9UK17 655 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 PCDHGA4Q9Y5G9 962 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 NBEAQ8NFP9 2946 aa10.34□□□□□ -0.75
ATG4B-219ENST00000479941 MGAQ8IWI9 3026 aa10.33□□□□□ -0.75
ATG4B-219ENST00000479941 LOC400499M0QZD8 3231 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 A0A1B0GX78 115 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 COPEO14579 308 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 DSCR3O14972 297 aa10.33□□□□□ -0.76
ATG4B-219ENST00000479941 OR1F1O43749 312 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms