RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 FUBP3Q96I24 572 aaKnown RBP eCLIP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 MSLNLQ96KJ4 702 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 C17orf62Q9BQA9 187 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 TRNAU1APQ9NX07 287 aaKnown RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 NOCTQ9UK39 431 aaKnown RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 CORO1CQ9ULV4 474 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 RNF11Q9Y3C5 154 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 SLC7A4O43246 635 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 RFPL2O75678 378 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 GJB5O95377 273 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 ARRB1P49407 418 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 C4orf46Q504U0 113 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 ACDQ96AP0 544 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 HSPBAP1Q96EW2 488 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 NODALQ96S42 347 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 POLR2J2Q9GZM3 115 aaKnown RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 AKTIPQ9H8T0 292 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 TRIM64BA6NI03 449 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 RNF13O43567 381 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 SCO2O43819 266 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 NUDT6P53370 316 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 CLRN1P58418 232 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 ZNF280AP59817 542 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 HERVK_113P63132 956 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 PRKD1Q15139 912 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 RBM20Q5T481 1227 aaKnown RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 RNF220Q5VTB9 566 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 OR10G2Q8NGC3 310 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 ERVK-6Q9BXR3 956 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 SLC32A1Q9H598 525 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 LYARQ9NX58 379 aaKnown RBP10.06□□□□□ -0.8
SHPRH-206ENST00000438092 ERVK-18Q9QC07 812 aa10.06□□□□□ -0.8
SHPRH-206ENST00000438092 MYH3P11055 1940 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 FAM234BA2RU67 622 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PDLIM1O00151 329 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 GRID2O43424 1007 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 DNAJA2O60884 412 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 CCNKO75909 580 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 UQCRC1P31930 480 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 RFTN1Q14699 578 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 LASP1Q14847 261 aaKnown RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 CWF19L1Q69YN2 538 aaKnown RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 MSANTD1Q6ZTZ1 278 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 NKX2-4Q9H2Z4 354 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 SPATA31D1Q6ZQQ2 1576 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 OR6C74A6NCV1 312 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 ANKRD66B4E2M5 251 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PLK4O00444 970 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 RHOP08100 348 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 MRPL3P09001 348 aaKnown RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 OGNP20774 298 aaKnown RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 ARL3P36405 182 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PNLIPRP1P54315 467 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 AAGABQ6PD74 315 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 ZNF782Q6ZMW2 699 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 GJD3Q8N144 294 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PNLDC1Q8NA58 520 aaKnown RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 TTLQ8NG68 377 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 NKD2Q969F2 451 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 KIAA1143Q96AT1 154 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 CNDP2Q96KP4 475 aaKnown RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 A0A0U1RQF3 1178 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 LATO43561 262 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PLATP00750 562 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 S100A6P06703 90 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 GRK5P34947 590 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 ZNF234Q14588 700 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 MS4A13Q5J8X5 152 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 RBM48Q5RL73 367 aaKnown RBP10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PRAMEF17Q5VTA0 474 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 SSX6Q7RTT6 188 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 GOLGA7Q7Z5G4 137 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 IRF7Q92985 503 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 BORCS8Q96FH0 119 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 CMTM7Q96FZ5 175 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 MNTQ99583 582 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 ARHGAP39Q9C0H5 1083 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 H7BY64 318 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 HSPA12AO43301 675 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 DECR1Q16698 335 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 BICRALQ6AI39 1079 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PYHIN1Q6K0P9 492 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 FITM2Q8N6M3 262 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PRAP1Q96NZ9 151 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 RNF186Q9NXI6 227 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 SPATA7Q9P0W8 599 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 FEZF1A0PJY2 475 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 FABP12A6NFH5 140 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 L7N2F9 121 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 LEFTY1O75610 366 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 C6orf47O95873 294 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 GP1BBP13224 206 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 VAMP2P63027 116 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 ZFP69Q49AA0 526 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 C22orf39Q6P5X5 142 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 BRAT1Q6PJG6 821 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 OR4F6Q8NGB9 312 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 ORAI3Q9BRQ5 295 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 SCML2Q9UQR0 700 aa10.05□□□□□ -0.8
SHPRH-206ENST00000438092 PCP4L1A6NKN8 68 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms