RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 NADKO95544 446 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 SERPINA1P01009 418 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 KLKB1P03952 638 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 BCKDHAP12694 445 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 S100A1P23297 94 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GTF2E2P29084 291 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 ATN1P54259 1190 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 PCBP3P57721 371 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 CAP1Q01518 475 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 SREBF2Q12772 1141 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 GALNT3Q14435 633 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 DDR2Q16832 855 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TRIM16LQ309B1 348 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ZNF404Q494X3 552 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 IL31Q6EBC2 164 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ADAMTSL2Q86TH1 951 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 STK32CQ86UX6 486 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 COMTD1Q86VU5 262 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ZSWIM9Q86XI8 627 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 LRRC56Q8IYG6 542 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 TCAIMQ8N3R3 496 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ARL10Q8N8L6 244 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 TP53I13Q8NBR0 393 aaPredicted RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 SIMC1Q8NDZ2 872 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 OR2T12Q8NG77 320 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 OR7G1Q8NGA0 311 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 OR10Q1Q8NGQ4 319 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 WDR20Q8TBZ3 569 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 BTN2A2Q8WVV5 523 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 WBP2Q969T9 261 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 MARVELD3Q96A59 401 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ZC3HAV1LQ96H79 300 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 TWSG1Q9GZX9 223 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 OR51E2Q9H255 320 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CCDC68Q9H2F9 335 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 PIF1Q9H611 641 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 NEK6Q9HC98 313 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 CHD7Q9P2D1 2997 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 MKLN1Q9UL63 735 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 RBMX2Q9Y388 322 aaKnown RBP5.27□□□□□ -1.57
VPS50-202ENST00000305866 PCDHGB6Q9Y5F9 930 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 LYVE1Q9Y5Y7 322 aa5.27□□□□□ -1.57
VPS50-202ENST00000305866 ELOVL7A1L3X0 281 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ARRDC5A6NEK1 342 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 TNFRSF21O75509 655 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ANGPTL1O95841 491 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 TBX6O95947 436 aaPredicted RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 CHRNB1P11230 501 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 SDC1P18827 310 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 CBLP22681 906 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 WEE1P30291 646 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 HOXD11P31277 338 aaPredicted RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 PIK3CGP48736 1102 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 GPLD1P80108 840 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ZNF45Q02386 682 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 PLEKHG6Q3KR16 790 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ADGRF1Q5T601 910 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 C6orf183Q5T699 404 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 GLB1LQ6UWU2 654 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 CXCL17Q6UXB2 119 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 RGL4Q8IZJ4 473 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 FAM9CQ8IZT9 166 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 DCBLD1Q8N8Z6 715 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 DCAF4L2Q8NA75 395 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 PPP3R2Q96LZ3 170 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 HTATIP2Q9BUP3 242 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ADGRE3Q9BY15 652 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ITPAQ9BY32 194 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 MRPL9Q9BYD2 267 aaKnown RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 CD244Q9BZW8 370 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ARHGAP39Q9C0H5 1083 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 NDUFAF4Q9P032 175 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 KCMF1Q9P0J7 381 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 SH3BP4Q9P0V3 963 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 UBA2Q9UBT2 640 aaPredicted RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 POLR3HQ9Y535 204 aaPredicted RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 FAM172BPA6NC97 362 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 C2orf81A6NN90 581 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 IQCF5A8MTL0 148 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 PLOD3O60568 738 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ERN1O75460 977 aaKnown RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 LGI1O95970 557 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 POMCP01189 267 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 DNTTP04053 509 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ACRV1P26436 265 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 BTCP35070 178 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 RGS6P49758 472 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ACLYP53396 1101 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 KCNK10P57789 538 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 ZXDBP98169 803 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 TAF10Q12962 218 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 NPRL3Q12980 569 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 CRHR2Q13324 411 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 PCSK7Q16549 785 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 FAM98BQ52LJ0 330 aaKnown RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 C10orf62Q5T681 223 aaPredicted RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 CCBE1Q6UXH8 406 aaPredicted RBP5.26□□□□□ -1.57
VPS50-202ENST00000305866 HTR3DQ70Z44 454 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 LRRC70Q7Z2Q7 622 aa5.26□□□□□ -1.57
VPS50-202ENST00000305866 VTCN1Q7Z7D3 282 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms