RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 DPP10Q8N608 796 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 AMER2Q8N7J2 671 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 NCLNQ969V3 563 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 CDADC1Q9BWV3 514 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 TNKS2Q9H2K2 1166 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 RIBC2Q9H4K1 309 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 SLA2Q9H6Q3 261 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 LATS2Q9NRM7 1088 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 SLC25A37Q9NYZ2 338 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 DSCR3O14972 297 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 FAM20BO75063 409 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 SEC22BO75396 215 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 OTCP00480 354 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 ITGAMP11215 1152 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 HMGA1P17096 107 aaKnown RBP15.11■□□□□ 0.01
UBAP1-201ENST00000297661 DDOSTP39656 456 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 DEFB103AP81534 67 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 C19orf57Q0VDD7 668 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 GBX1Q14549 363 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 LAPTM4AQ15012 233 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 CPSF6Q16630 551 aaKnown RBP eCLIP15.11■□□□□ 0.01
UBAP1-201ENST00000297661 ZC3H12BQ5HYM0 836 aaKnown RBP15.11■□□□□ 0.01
UBAP1-201ENST00000297661 SUSD1Q6UWL2 747 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 ADAMTSL2Q86TH1 951 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 MSRB3Q8IXL7 192 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 APCDD1Q8J025 514 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 GRPEL2Q8TAA5 225 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 SLC38A4Q969I6 547 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 GORASP2Q9H8Y8 452 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 ZNF490Q9ULM2 529 aaPredicted RBP15.11■□□□□ 0.01
UBAP1-201ENST00000297661 CCL27Q9Y4X3 112 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 PLXNA4Q9HCM2 1894 aa15.11■□□□□ 0.01
UBAP1-201ENST00000297661 LOC730098B7Z3J9 87 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 SEMA3DO95025 777 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 MRPL19P49406 292 aaKnown RBP15.1■□□□□ 0.01
UBAP1-201ENST00000297661 CXCR4P61073 352 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 MLLT1Q03111 559 aaPredicted RBP15.1■□□□□ 0.01
UBAP1-201ENST00000297661 KIAA0040Q15053 153 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 PCBP2Q15366 365 aaKnown RBP eCLIP15.1■□□□□ 0.012e-7■■■■■ 45.5
UBAP1-201ENST00000297661 MAPKAPK3Q16644 382 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 Q5BKY6 102 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 FAM109BQ6ICB4 259 aaPredicted RBP15.1■□□□□ 0.01
UBAP1-201ENST00000297661 ANKS3Q6ZW76 656 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 DEPDC4Q8N2C3 294 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 GTF2H4Q92759 462 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 TTLL2Q9BWV7 592 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 C14orf119Q9NWQ9 140 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 PIKFYVEQ9Y2I7 2098 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 GRXCR1A8MXD5 290 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 IGFBP5P24593 272 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 GPLD1P80108 840 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 ZXDBP98169 803 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 CYP4F3Q08477 520 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 ARHGEF7Q14155 803 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 BCL7AQ4VC05 210 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 LRRC73Q5JTD7 316 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 ARMC12Q5T9G4 340 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.1■□□□□ 0.01
UBAP1-201ENST00000297661 TSPAN33Q86UF1 283 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 FAM162AQ96A26 154 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 RHBDF1Q96CC6 855 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 MYO19Q96H55 970 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 CITED4Q96RK1 184 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 ITPAQ9BY32 194 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 DPY30Q9C005 99 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 IL26Q9NPH9 171 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 RPRD1BQ9NQG5 326 aaKnown RBP15.1■□□□□ 0.01
UBAP1-201ENST00000297661 TRPM5Q9NZQ8 1165 aa15.1■□□□□ 0.01
UBAP1-201ENST00000297661 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.1■□□□□ 0.01
UBAP1-201ENST00000297661 UPK3BL1B0FP48 263 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 UPK3BL2E5RIL1 263 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 TEX28O15482 410 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 LRATO95237 230 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 HMGCLP35914 325 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 SMAD3P84022 425 aaKnown RBP15.09■□□□□ 0.01
UBAP1-201ENST00000297661 TBRG1Q3YBR2 411 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 ZNF438Q7Z4V0 828 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 RGL4Q8IZJ4 473 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 CCDC115Q96NT0 180 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 NXF2Q9GZY0 626 aaKnown RBP15.09■□□□□ 0.01
UBAP1-201ENST00000297661 TAS2R9Q9NYW1 312 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 A3GALT2U3KPV4 340 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 REV3LO60673 3130 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 FAM25AB3EWG3 89 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 FAM25CB3EWG5 89 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 FAM25GB3EWG6 89 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 DNTTP04053 509 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 GADD45AP24522 165 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 RRM2P31350 389 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 CHRNA6Q15825 494 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 DUSP7Q16829 419 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 RFLNAQ6ZTI6 216 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 AHSA2Q719I0 299 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 DET1Q7L5Y6 550 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 NRARPQ7Z6K4 114 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 CYP4Z1Q86W10 505 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 AADATQ8N5Z0 425 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 NATD1Q8N6N6 113 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 PIH1D2Q8WWB5 315 aa15.09■□□□□ 0.01
UBAP1-201ENST00000297661 COQ7Q99807 217 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms