RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 BLKP51451 505 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 SLC30A8Q8IWU4 369 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 SLC15A3Q8IY34 581 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 PYURFQ96I23 114 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 MYO7AQ13402 2215 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 PSMD11O00231 422 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 KMOO15229 486 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 DIRAS1O95057 198 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 IL12AP29459 219 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 ALG11Q2TAA5 492 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 PYDC2Q56P42 97 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 NOXRED1Q6NXP6 359 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 COX18Q8N8Q8 333 aa17.07■□□□□ 0.32
SCARB2-223ENST00000640640 AURKBQ96GD4 344 aaPredicted RBP17.07■□□□□ 0.32
SCARB2-223ENST00000640640 KAT8Q9H7Z6 458 aaKnown RBP17.07■□□□□ 0.32
SCARB2-223ENST00000640640 DDX60LQ5H9U9 1706 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 LOC110117498-PIK3R3F6TDL0 507 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 GRIK2Q13002 908 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TRIM71Q2Q1W2 868 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TMPRSS11AQ6ZMR5 421 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 HMGB4Q8WW32 186 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 SORCS1Q8WY21 1168 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 SLC38A3Q99624 504 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 YIPF4Q9BSR8 244 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TVP23BQ9NYZ1 205 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 DLGAP4Q9Y2H0 992 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TNRC6CQ9HCJ0 1690 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 DUXAA6NLW8 204 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TGM5O43548 720 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 C4BPBP20851 252 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 FMO3P31513 532 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 RANBP3LQ86VV4 465 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 CNPPD1Q9BV87 410 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 THUMPD1Q9NXG2 353 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 NHSQ6T4R5 1651 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 JUNP05412 331 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 CD70P32970 193 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TMEM126BQ8IUX1 230 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 PDPRQ8NCN5 879 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 FUBP1Q96AE4 644 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 ART5Q96L15 291 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 YTHDF1Q9BYJ9 559 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 BPIP17213 487 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 GALNT1Q10472 559 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 ZSWIM7Q19AV6 140 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TCEAL8Q8IYN2 117 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 TRAM1L1Q8N609 369 aa17.06■□□□□ 0.32
SCARB2-223ENST00000640640 GEMIN6Q8WXD5 167 aaKnown RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 GAS2L1Q99501 681 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 COL22A1Q8NFW1 1626 aaPredicted RBP17.06■□□□□ 0.32
SCARB2-223ENST00000640640 WASH4PA8MWX3 477 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 LDB2O43679 373 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 MATN4O95460 622 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 PAK4O96013 591 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 T-ENOLP0DO92 83 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 SRP54P61011 504 aaKnown RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ZNF763Q0D2J5 394 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 OGFOD2Q6N063 350 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 CEACAM20Q6UY09 585 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ADGRG6Q86SQ4 1221 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 C12orf76Q8N812 135 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 FIBINQ8TAL6 211 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 MRPS17Q9Y2R5 130 aaKnown RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 PGRMC2O15173 223 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 DFNA5O60443 496 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 BCKDHAP12694 445 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ALDH3A2P51648 485 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ATP12AP54707 1039 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 TAF13Q15543 124 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ERN2Q76MJ5 926 aaKnown RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 TMEM25Q86YD3 366 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 OR4K1Q8NGD4 311 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 GPR151Q8TDV0 419 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 SCRN2Q96FV2 425 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 PKP4Q99569 1192 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 CMTM6Q9NX76 183 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 IL17CQ9P0M4 197 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 P2RX2Q9UBL9 471 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 A0A0J9YVX5 310 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 TRBC2A0A5B9 178 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 NDUFS4O43181 175 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 HNRNPA1P09651 372 aaKnown RBP eCLIP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 HOXB2P14652 356 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 FPR1P21462 350 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 SLC13A2Q13183 592 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 NDUFAF6Q330K2 333 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 TSPAN33Q86UF1 283 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 TMC8Q8IU68 726 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 SGIP1Q9BQI5 828 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 IGSF5Q9NSI5 407 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ZNF99A8MXY4 864 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 HTRA2O43464 458 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 MEF2AQ02078 507 aaPredicted RBP17.05■□□□□ 0.32
SCARB2-223ENST00000640640 GRM2Q14416 872 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ABRAXAS2Q15018 415 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 LIPJQ5W064 366 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 CST9Q5W186 159 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 ANKRD26P1Q6NSI1 321 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 CGB2Q6NT52 195 aa17.05■□□□□ 0.32
SCARB2-223ENST00000640640 BLOC1S3Q6QNY0 202 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms