RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 FBXO42Q6P3S6 717 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 LRRC8BQ6P9F7 803 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 C4orf22Q6V702 233 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 PAQR7Q86WK9 346 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 AMER2Q8N7J2 671 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 MARVELD3Q96A59 401 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 LMF1Q96S06 567 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 KIFC1Q9BW19 673 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 CCDC68Q9H2F9 335 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 FBXO6Q9NRD1 293 aaPredicted RBP13.03□□□□□ -0.32
HDAC5-208ENST00000588419 C14orf105Q9NVL8 296 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 RIC8BQ9NVN3 520 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 SAMD15Q9P1V8 674 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 CREBBPQ92793 2442 aa13.03□□□□□ -0.32
HDAC5-208ENST00000588419 IGHV1-45A0A0A0MS14 117 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 TRAV17A0A0B4J275 112 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 IGKV1-8A0A0C4DH67 115 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF839A8K0R7 811 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 MYO1CO00159 1063 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 CEP104O60308 925 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 MATN4O95460 622 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 ITGAMP11215 1152 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 PKMP14618 531 aaKnown RBP13.02□□□□□ -0.33
HDAC5-208ENST00000588419 TPSB2P20231 275 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 ATP5DP30049 168 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 CXCR5P32302 372 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 DHX34Q14147 1143 aaKnown RBP13.02□□□□□ -0.33
HDAC5-208ENST00000588419 TPSAB1Q15661 275 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 ZRSR2Q15696 482 aaKnown RBP13.02□□□□□ -0.33
HDAC5-208ENST00000588419 TTLL9Q3SXZ7 439 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 ATG9BQ674R7 924 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 KIAA0930Q6ICG6 404 aaPredicted RBP13.02□□□□□ -0.33
HDAC5-208ENST00000588419 HIBCHQ6NVY1 386 aaPredicted RBP13.02□□□□□ -0.33
HDAC5-208ENST00000588419 GFRALQ6UXV0 394 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 GAS2L3Q86XJ1 694 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 AMER3Q8N944 861 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 MAIP1Q8WWC4 291 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 SLC30A3Q99726 388 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 SLX1AQ9BQ83 275 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 DRC3Q9H069 523 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 MKKSQ9NPJ1 570 aaPredicted RBP13.02□□□□□ -0.33
HDAC5-208ENST00000588419 UTP6Q9NYH9 597 aaKnown RBP13.02□□□□□ -0.33
HDAC5-208ENST00000588419 MKL2Q9ULH7 1088 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 KLK4Q9Y5K2 254 aa13.02□□□□□ -0.33
HDAC5-208ENST00000588419 IGLV3-12A0A075B6K2 115 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 TRGV8A0A0C4DH27 118 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 IGHV3-20A0A0C4DH32 117 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 A0A1B0GUH1 482 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 GOLGA8MH3BSY2 632 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 PHF2O75151 1096 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 PSIP1O75475 530 aaKnown RBP13.01□□□□□ -0.33
HDAC5-208ENST00000588419 SLC16A8O95907 504 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 SERPINA7P05543 415 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 ERGP11308 486 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 EZRP15311 586 aaKnown RBP13.01□□□□□ -0.33
HDAC5-208ENST00000588419 CDC25BP30305 580 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 SOX11P35716 441 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 AVPR1BP47901 424 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 TNFSF10P50591 281 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 SARNPP82979 210 aaKnown RBP13.01□□□□□ -0.33
HDAC5-208ENST00000588419 ZNF33BQ06732 778 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 GPS1Q13098 491 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 THOC5Q13769 683 aaKnown RBP13.01□□□□□ -0.33
HDAC5-208ENST00000588419 GBX1Q14549 363 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 NDUFA9Q16795 377 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 MINDY4Q4G0A6 757 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 NEK10Q6ZWH5 1172 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 CENPUQ71F23 418 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 CILP2Q8IUL8 1156 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 ZC3H7AQ8IWR0 971 aaKnown RBP13.01□□□□□ -0.33
HDAC5-208ENST00000588419 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 SUN3Q8TAQ9 357 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 ZCCHC10Q8TBK6 192 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 ALKBH8Q96BT7 664 aaKnown RBP13.01□□□□□ -0.33
HDAC5-208ENST00000588419 MVB12AQ96EY5 273 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 TAAR6Q96RI8 345 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 MRPS2Q9Y399 296 aaKnown RBP13.01□□□□□ -0.33
HDAC5-208ENST00000588419 CRYBG3Q68DQ2 2970 aa13.01□□□□□ -0.33
HDAC5-208ENST00000588419 MYO9AB2RTY4 2548 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 FOXS1O43638 330 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 SEC24DO94855 1032 aaPredicted RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 UNC5CO95185 931 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 BMP10O95393 424 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 WDPCPO95876 746 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 C8orf89P0DMQ9 161 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 FDXRP22570 491 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 TNFRSF8P28908 595 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 SLC26A3P40879 764 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 ST13P50502 369 aaKnown RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 PMP22Q01453 160 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 PRDX1Q06830 199 aaKnown RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 CTBP1Q13363 440 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 ARHGAP19Q14CB8 494 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 PCOLCEQ15113 449 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 ABHD17BQ5VST6 288 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 ANKRD22Q5VYY1 191 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 NEPROQ6NW34 567 aa13□□□□□ -0.33
HDAC5-208ENST00000588419 RPUSD3Q6P087 351 aaKnown RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 DRICH1Q6PGQ1 229 aaPredicted RBP13□□□□□ -0.33
HDAC5-208ENST00000588419 LANCL3Q6ZV70 420 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms