RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 SSPNQ14714 243 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ARHGAP19Q14CB8 494 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 RBBP7Q16576 425 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 FAM214AQ32MH5 1076 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 C18orf21Q32NC0 220 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 STEAP4Q687X5 459 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ZNF425Q6IV72 752 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 FAM45BPQ6NSW5 357 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 PRSS41Q7RTY9 318 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 CNTN4Q8IWV2 1026 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 SPATA6LQ8N4H0 392 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 FAM45AQ8TCE6 357 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 MCOLN3Q8TDD5 553 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 PYROXD1Q8WU10 500 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ZNF592Q92610 1267 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 RERGQ96A58 199 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 MMABQ96EY8 250 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ZNF285Q96NJ3 590 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 OR2A5Q96R48 311 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 SPSB2Q99619 263 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 C17orf62Q9BQA9 187 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 NAT9Q9BTE0 207 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 CRB3Q9BUF7 120 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 CLMPQ9H6B4 373 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 CAB39LQ9H9S4 337 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ZBTB20Q9HC78 741 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ZNF304Q9HCX3 659 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 CCDC177Q9NQR7 707 aaPredicted RBP9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ARL15Q9NXU5 204 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 GPR83Q9NYM4 423 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ZFATQ9P243 1243 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 TRPC4Q9UBN4 977 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 FBXL4Q9UKA2 621 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 VWA7Q9Y334 891 aa9.03□□□□□ -0.96
NSMCE1-203ENST00000562039 ESYT3A0FGR9 886 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 FITM1A5D6W6 292 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 PABPN1LA6NDY0 278 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 OR2W5A6NFC9 320 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 ZNF839A8K0R7 811 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 CDC7O00311 574 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 SOCS6O14544 535 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 PHGDHO43175 533 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 LCMT2O60294 686 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 SRPX2O60687 465 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 JRKO75564 520 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 CCNDBP1O95273 360 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 FKBP9O95302 570 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 TSPAN12O95859 305 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 B3GALT4O96024 378 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 SERPIND1P05546 499 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 C8GP07360 202 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 HIST1H2AGP0C0S8 130 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 PIM1P11309 404 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 IL1RNP18510 177 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 HIST1H2ADP20671 130 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 HSD17B2P37059 387 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 PLTPP55058 493 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 TAS2R39P59534 338 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 IL2P60568 153 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 ETF1P62495 437 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 CSNK1G2P78368 415 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 KLC1Q07866 573 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 CALCOCO2Q13137 446 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 ZXDCQ2QGD7 858 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 MUM1Q2TAK8 710 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 PRTGQ2VWP7 1150 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 FBXO48Q5FWF7 155 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 DCAF10Q5QP82 559 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 MED25Q71SY5 747 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 CEP97Q8IW35 865 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 GALNT16Q8N428 558 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 RBMXL3Q8N7X1 1067 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 TMEM102Q8N9M5 508 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 FBXO15Q8NCQ5 510 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 OR9A4Q8NGU2 314 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 GABPB2Q8TAK5 448 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 STT3BQ8TCJ2 826 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 ANKRD49Q8WVL7 239 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 MIEF2Q96C03 454 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 MRRFQ96E11 262 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 HIST1H2AHQ96KK5 128 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 CCDC138Q96M89 665 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 C16orf45Q96MC5 204 aaPredicted RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 TSNARE1Q96NA8 513 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 HIST1H2AJQ99878 128 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 ERP44Q9BS26 406 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 H2AFJQ9BTM1 129 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 RBCK1Q9BYM8 510 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 PARVBQ9HBI1 364 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 GRHL1Q9NZI5 618 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 HCN3Q9P1Z3 774 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 KLHL42Q9P2K6 505 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 MTO1Q9Y2Z2 717 aaKnown RBP9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 HS3ST3B1Q9Y662 390 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 SCN2AQ99250 2005 aa9.02□□□□□ -0.97
NSMCE1-203ENST00000562039 TENM4Q6N022 2769 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 CTAGE15A4D2H0 777 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 FAM187AA6NFU0 413 aa9.01□□□□□ -0.97
NSMCE1-203ENST00000562039 ZNF860A6NHJ4 632 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms