RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 DRC3Q9H069 523 aa21.94■■□□□ 1.1
SMARCD1-209ENST00000550477 CCDC68Q9H2F9 335 aa21.94■■□□□ 1.1
SMARCD1-209ENST00000550477 HOMER3Q9NSC5 361 aa21.94■■□□□ 1.1
SMARCD1-209ENST00000550477 STOX2Q9P2F5 926 aaPredicted RBP21.94■■□□□ 1.1
SMARCD1-209ENST00000550477 RUVBL1Q9Y265 456 aaKnown RBP21.94■■□□□ 1.1
SMARCD1-209ENST00000550477 IGHV1-45A0A0A0MS14 117 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 A0A0U1RQJ8 604 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 PRSS44E7EML9 344 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 MYO1CO00159 1063 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 PSIP1O75475 530 aaKnown RBP21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 RASAL1O95294 804 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 ERGP11308 486 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 TNFRSF8P28908 595 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 SOX11P35716 441 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 SLC26A3P40879 764 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 PNLIPRP1P54315 467 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 CENPEQ02224 2701 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 EEF1A2Q05639 463 aaKnown RBP21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 FAM53BQ14153 422 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 LONRF1Q17RB8 773 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 ABHD17BQ5VST6 288 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 ICE2Q659A1 982 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 FAAH2Q6GMR7 532 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 MTFR2Q6P444 385 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 MYO7BQ6PIF6 2116 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 GFRALQ6UXV0 394 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 ADCK2Q7Z695 626 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 SRRM1Q8IYB3 904 aaKnown RBP21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 RELTQ969Z4 430 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 TUBB6Q9BUF5 446 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 RBSNQ9H1K0 784 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 PLA2G3Q9NZ20 509 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 SAMD15Q9P1V8 674 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 TAC3Q9UHF0 121 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 SOX13Q9UN79 622 aa21.93■■□□□ 1.1
SMARCD1-209ENST00000550477 HEATR5BQ9P2D3 2071 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 A0A1W2PQ72 361 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 ARHGAP10A1A4S6 786 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 KRT87PA6NCN2 255 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 ARHGEF33A8MVX0 844 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 TPSB2P20231 275 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 RBPJQ06330 500 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 GBX1Q14549 363 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 TPSAB1Q15661 275 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 THEMIS2Q5TEJ8 643 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 KIAA0930Q6ICG6 404 aaPredicted RBP21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 CASC4Q6P4E1 433 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 CES3Q6UWW8 571 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 NEK10Q6ZWH5 1172 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 PAQR7Q86WK9 346 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 PSMF1Q92530 271 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 FAM136AQ96C01 138 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 RNF32Q9H0A6 362 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 INTS10Q9NVR2 710 aaKnown RBP21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 SYBUQ9NX95 663 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 MKL2Q9ULH7 1088 aa21.92■■□□□ 1.1
SMARCD1-209ENST00000550477 GOLGA8KD6RF30 607 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 GOLGA8TH3BQL2 631 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 ZBTB14O43829 449 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 NRP2O60462 931 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 SYF2O95926 243 aaKnown RBP21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 CASP6P55212 293 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 HKDC1Q2TB90 917 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 ACSBG2Q5FVE4 666 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 EEF1AKMT2Q5JPI9 291 aaKnown RBP21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 MEI1Q5TIA1 1274 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 TMEM207Q6UWW9 146 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 OR2A5Q96R48 311 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 PKP4Q99569 1192 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 STMN3Q9NZ72 180 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 C19orf25Q9UFG5 118 aaPredicted RBP21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 PCYOX1Q9UHG3 505 aa21.91■■□□□ 1.1
SMARCD1-209ENST00000550477 LOC102723996A0A087X1L8 192 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 A0A0A6YYC8 382 aaPredicted RBP21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 MAGEB16A2A368 324 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 CTAGE9A4FU28 777 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 I3L1I5 382 aaPredicted RBP21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 C8orf89P0DMQ9 161 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 HRH2P25021 359 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 ARNTP27540 789 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 YBX1P67809 324 aaKnown RBP21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 THOC5Q13769 683 aaKnown RBP21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 ZNF324BQ6AW86 544 aaPredicted RBP21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 NEPROQ6NW34 567 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 CILP2Q8IUL8 1156 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 FBXO15Q8NCQ5 510 aaPredicted RBP21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 MESP1Q9BRJ9 268 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 ZNF700Q9H0M5 742 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 ABCF3Q9NUQ8 709 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 ABI3Q9P2A4 366 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 KLHL42Q9P2K6 505 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 CROCCQ5TZA2 2017 aa21.9■■□□□ 1.1
SMARCD1-209ENST00000550477 TRGV8A0A0C4DH27 118 aa21.89■■□□□ 1.09
SMARCD1-209ENST00000550477 SMAPO00193 183 aa21.89■■□□□ 1.09
SMARCD1-209ENST00000550477 WDPCPO95876 746 aa21.89■■□□□ 1.09
SMARCD1-209ENST00000550477 FGGP02679 453 aa21.89■■□□□ 1.09
SMARCD1-209ENST00000550477 CYC1P08574 325 aa21.89■■□□□ 1.09
SMARCD1-209ENST00000550477 ENO3P13929 434 aaPredicted RBP21.89■■□□□ 1.09
SMARCD1-209ENST00000550477 KCNK10P57789 538 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms