RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 SLC1A2P43004 574 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 SOX8P57073 446 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 MPP1Q00013 466 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 PRDX1Q06830 199 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 KLC1Q07866 573 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 GBX1Q14549 363 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ARHGAP19Q14CB8 494 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 PPP1R7Q15435 360 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 HIF1AQ16665 826 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 LONRF1Q17RB8 773 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 MUM1Q2TAK8 710 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 C4orf17Q53FE4 359 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 HSP90AA5PQ58FG0 334 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 VWA2Q5GFL6 755 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 AGAP7PQ5VUJ5 663 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ARMC3Q5W041 872 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ICE2Q659A1 982 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 HIST2H2BCQ6DN03 193 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 FAAH2Q6GMR7 532 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 PRMT9Q6P2P2 845 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 IGFL3Q6UXB1 125 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 CYHR1Q6ZMK1 362 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 LINC00696Q6ZRV3 163 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 AGGF1Q8N302 714 aaeCLIP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 CSNK1A1LQ8N752 337 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 OR11G2Q8NGC1 345 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 GIMAP7Q8NHV1 300 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 DNAJB14Q8TBM8 379 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 STT3BQ8TCJ2 826 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF480Q8WV37 535 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ASB11Q8WXH4 323 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 INPP5DQ92835 1189 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 RERGQ96A58 199 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 NACC2Q96BF6 587 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ALKBH8Q96BT7 664 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 MIEF2Q96C03 454 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 C8orf44Q96CB5 159 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 THOC3Q96J01 351 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 VPS50Q96JG6 964 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 SIGLEC10Q96LC7 697 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 AGAP4Q96P64 663 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 GPR21Q99679 349 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 PLCD4Q9BRC7 762 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 MESP1Q9BRJ9 268 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 KRTAP4-6Q9BYQ5 205 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 SLC29A3Q9BZD2 475 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 SLC26A1Q9H2B4 701 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF160Q9HCG1 818 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 SEMA3GQ9NS98 782 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 IARS2Q9NSE4 1012 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 TRMT1Q9NXH9 659 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 UTP6Q9NYH9 597 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 TRPC4Q9UBN4 977 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF282Q9UDV7 671 aaPredicted RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 C3orf18Q9UK00 162 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 NXT1Q9UKK6 140 aaKnown RBP6.39□□□□□ -1.39
SCAF11-211ENST00000547950 FBXO5Q9UKT4 447 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 CDC14AQ9UNH5 594 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 DHRS7Q9Y394 339 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 NEU2Q9Y3R4 380 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 KLK4Q9Y5K2 254 aa6.39□□□□□ -1.39
SCAF11-211ENST00000547950 A0A0A6YYC8 382 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 GOLGA6L10A0A0M3HER8 536 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 A1L4Q6 167 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF839A8K0R7 811 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 E7ENX8 843 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 H7BY64 318 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 I3L1I5 382 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 GFYI3L273 518 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PHF2O75151 1096 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 BANF1O75531 89 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CCNDBP1O95273 360 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CBX6O95503 412 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ANXA5P08758 320 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 FBXO45P0C2W1 286 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 MPC1LP0DKB6 136 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ERGP11308 486 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ACPPP15309 386 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 FBLP22087 321 aaKnown RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CXCR2P25025 360 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CARSP49589 748 aaKnown RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 GSK3AP49840 483 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 EMP2P54851 167 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 TAP2Q03519 686 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 Q0VFX4 171 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ELOAQ14241 798 aaKnown RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 NAA25Q14CX7 972 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CYP1B1Q16678 543 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 HKDC1Q2TB90 917 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PRTGQ2VWP7 1150 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 TUBB8Q3ZCM7 444 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 HP1BP3Q5SSJ5 553 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 ZNF425Q6IV72 752 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 Q6ZS92 163 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 NEK10Q6ZWH5 1172 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 UBE2R2Q712K3 238 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 RNF44Q7L0R7 432 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PIWIL4Q7Z3Z4 852 aaKnown RBP6.38□□□□□ -1.39
SCAF11-211ENST00000547950 CUZD1Q86UP6 607 aa6.38□□□□□ -1.39
SCAF11-211ENST00000547950 PAQR7Q86WK9 346 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms