RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 TRA2AQ13595 282 aaKnown RBP eCLIP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PCLAFQ15004 111 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 CHI3L2Q15782 390 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 TBCCQ15814 346 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 COL28A1Q2UY09 1125 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 C18orf21Q32NC0 220 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 TUBB8Q3ZCM7 444 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 UNC50Q53HI1 259 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 FBXO48Q5FWF7 155 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 XKR6Q5GH73 641 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 SNAP47Q5SQN1 464 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 LIPJQ5W064 366 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 ATG9BQ674R7 924 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 CYB5D1Q6P9G0 228 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 FIGLAQ6QHK4 219 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 RBM44Q6ZP01 1051 aaKnown RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 FAM92BQ6ZTR7 304 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 GOLGA7Q7Z5G4 137 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 ADCK2Q7Z695 626 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 MILR1Q7Z6M3 343 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 KMT5CQ86Y97 462 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 AFAP1L2Q8N4X5 818 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 ABHD11Q8NFV4 315 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 OR2L3Q8NG85 312 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 OR2A1Q8NGT9 310 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 LRRC8CQ8TDW0 803 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF483Q8TF39 744 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 N4BP2L2Q92802 583 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 REPS1Q96D71 796 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 TCTN2Q96GX1 697 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PRAP1Q96NZ9 151 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 TMEM237Q96Q45 408 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 AIF1LQ9BQI0 150 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 TMEM79Q9BSE2 394 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 DPH7Q9BTV6 452 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 GATA5Q9BWX5 397 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 STRADBQ9C0K7 418 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PITHD1Q9GZP4 211 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 EHD1Q9H4M9 534 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 NOL11Q9H8H0 719 aaKnown RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 ACTR8Q9H981 624 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PELI2Q9HAT8 420 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PDE7BQ9NP56 450 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 MLXIPLQ9NP71 852 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 SEMA4BQ9NPR2 832 aaPredicted RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PFDN4Q9NQP4 134 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 OGFRQ9NZT2 677 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PDP2Q9P2J9 529 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 PCTPQ9UKL6 214 aa9.77□□□□□ -0.85
NEDD9-214ENST00000513989 FLNBO75369 2602 aaKnown RBP9.77□□□□□ -0.85
NEDD9-214ENST00000513989 A0A1W2PPV9 198 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 A0A1W2PQM1 296 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 TRABD2BA6NFA1 517 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 TMEM114B3SHH9 223 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 NTN3O00634 580 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 HSPA4LO95757 839 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 C9P02748 559 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 RPS17P08708 135 aaKnown RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 EBLN1P0CF75 366 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 BGNP21810 368 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 CSTF2P33240 577 aaKnown RBP eCLIP9.76□□□□□ -0.852e-7■■■■□ 23.8
NEDD9-214ENST00000513989 HNF4AP41235 474 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 CASP2P42575 452 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ATP1A2P50993 1020 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 CDH13P55290 713 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ABCE1P61221 599 aaKnown RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 HSD11B2P80365 405 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 PCDH1Q08174 1060 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 CYP4F3Q08477 520 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 GALNT1Q10472 559 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 CHIT1Q13231 466 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 SOWAHCQ53LP3 525 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ZC3H12BQ5HYM0 836 aaKnown RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 C10orf62Q5T681 223 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 PHF19Q5T6S3 580 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 DHRS13Q6UX07 377 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 PRSS42Q7Z5A4 293 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 MTERF4Q7Z6M4 381 aaKnown RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 MYLK4Q86YV6 388 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 TTLQ8NG68 377 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 TRPC4APQ8TEL6 797 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF75CPQ92670 426 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 NEIL2Q969S2 332 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 THAP11Q96EK4 314 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 PTCD3Q96EY7 689 aaKnown RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 CRELD1Q96HD1 420 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 BBC3Q96PG8 261 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 OR4K3Q96R72 315 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ZNF382Q96SR6 550 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 NRTNQ99748 197 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 MAP3K3Q99759 626 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 PLCD4Q9BRC7 762 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 EFCAB11Q9BUY7 163 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 MECRQ9BV79 373 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 NTMT1Q9BV86 223 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 CHRNA10Q9GZZ6 450 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ILKAPQ9H0C8 392 aaPredicted RBP9.76□□□□□ -0.85
NEDD9-214ENST00000513989 THAP1Q9NVV9 213 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 KLHL3Q9UH77 587 aa9.76□□□□□ -0.85
NEDD9-214ENST00000513989 ADGRE2Q9UHX3 823 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms