RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 C7orf31Q8N865 590 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 CAMKVQ8NCB2 501 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 GLIS3Q8NEA6 775 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 DMBX1Q8NFW5 382 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 ZNF384Q8TF68 577 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 SLC20A1Q8WUM9 679 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 CYGBQ8WWM9 190 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 BRI3BPQ8WY22 251 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 WBP1Q96G27 269 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 FAM83CQ9BQN1 747 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 BEX2Q9BXY8 128 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 MRPL37Q9BZE1 423 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 GPR62Q9BZJ7 368 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 GSX2Q9BZM3 304 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 KLHL31Q9H511 634 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 DDX31Q9H8H2 851 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 CERS4Q9HA82 394 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 PTTG3PQ9NZH4 202 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 CHORDC1Q9UHD1 332 aaPredicted RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 NOCTQ9UK39 431 aaKnown RBP4.04□□□□□ -1.76
CD55-208ENST00000476590 NUDT5Q9UKK9 219 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 ZNRF3Q9ULT6 936 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 TRAPPC4Q9Y296 219 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 SETBP1Q9Y6X0 1596 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 SIPA1L1O43166 1804 aa4.04□□□□□ -1.76
CD55-208ENST00000476590 SPEF2Q9C093 1822 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TRPM2O94759 1503 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CRB1P82279 1406 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ATP6AP2A0A1C7CYW4 349 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 GNG14A0A1W2PPG7 69 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 A0A1W2PPL8 197 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 BCLAF3A2AJT9 711 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 PGPEP1LA6NFU8 196 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 H0YAE9 185 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 H3BQ06 376 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 K7ERQ8 282 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 M0QYV0 167 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 DLGAP1O14490 977 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CD3EAPO15446 510 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 PSMD3O43242 534 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TGM5O43548 720 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SELENOFO60613 162 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MAFKO60675 156 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 BEST1O76090 585 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 LY86O95711 162 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CBX7O95931 251 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 C9P02748 559 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SOD2P04179 222 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TMEM253P0C7T8 217 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CBSLP0DN79 551 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 HLA-EP13747 358 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MUC1P15941 1255 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 CBR1P16152 277 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 RAB3BP20337 219 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PROZP22891 400 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MYL9P24844 172 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CCR7P32248 378 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 PCGF2P35227 344 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 CBSP35520 551 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 KCNJ1P48048 391 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 RARRES1P49788 294 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SUCLG1P53597 346 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 GP2P55259 537 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 KIAA1024LP59773 190 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 RPS6P62753 249 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 HTRA4P83105 476 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 GTF2BQ00403 316 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MEF2AQ02078 507 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 MBTD1Q05BQ5 628 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FSTL1Q12841 308 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ORC2Q13416 577 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 SEMA5AQ13591 1074 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 DYRK1AQ13627 763 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 DDX39BQ13838 428 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 EXOSC2Q13868 293 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 MESDQ14696 234 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 GANABQ14697 944 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 DRAP1Q14919 205 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 FAM98BQ52LJ0 330 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 KRTCAP3Q53RY4 240 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 TMEM240Q5SV17 173 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FAM182AQ5T1J6 154 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 KDM4DQ6B0I6 523 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FAM183BPQ6ZVS7 135 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 COPS6Q7L5N1 327 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 STRADAQ7RTN6 431 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ZNF571Q7Z3V5 609 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 ADGRD2Q7Z7M1 963 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 MON1AQ86VX9 555 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 P2RY8Q86VZ1 359 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 SLC13A5Q86YT5 568 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 C8orf59Q8N0T1 100 aaPredicted RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 ABRAQ8N0Z2 381 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 STX19Q8N4C7 294 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ZCCHC9Q8N567 271 aaKnown RBP4.03□□□□□ -1.76
CD55-208ENST00000476590 ZNF781Q8N8C0 355 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 OR13C3Q8NGS6 347 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 METTL21AQ8WXB1 218 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 ALG3Q92685 438 aa4.03□□□□□ -1.76
CD55-208ENST00000476590 FBXL20Q96IG2 436 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms