RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ZNF655	Q8N720	491 aa	Predicted RBP	9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	ABHD11	Q8NFV4	315 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	OR8K5	Q8NH50	307 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	CT55	Q8WUE5	264 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	HNRNPLL	Q8WVV9	542 aa	Known RBP	9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	C10orf90	Q96M02	699 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	TSNARE1	Q96NA8	513 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	EGFL8	Q99944	293 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	ZFYVE21	Q9BQ24	234 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	TRIM54	Q9BYV2	358 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	CPNE5	Q9HCH3	593 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	SLC22A11	Q9NSA0	550 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	ANKMY1	Q9P2S6	941 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	DHCR7	Q9UBM7	475 aa	Known RBP	9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	TBK1	Q9UHD2	729 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	TLK1	Q9UKI8	766 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	RNF112	Q9ULX5	631 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	SLC22A14	Q9Y267	594 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	MRPS2	Q9Y399	296 aa	Known RBP	9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	PCDHB3	Q9Y5E6	796 aa		9.82	□□□□□ -0.84
MRPL55-223	ENST00000459783	FEZF1	A0PJY2	475 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	FITM1	A5D6W6	292 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	SMIM23	A6NLE4	172 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	GOLGA8R	I6L899	631 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	TK2	O00142	265 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	ZSCAN9	O15535	394 aa	Predicted RBP	9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	ZZEF1	O43149	2961 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	KLK8	O60259	260 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CPNE3	O75131	537 aa	Known RBP	9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CNOT3	O75175	753 aa	Known RBP	9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CCNDBP1	O95273	360 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	NUDT17	P0C025	328 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	SPTB	P11277	2137 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CD22	P20273	847 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	VARS	P26640	1264 aa	Known RBP	9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	FOXL2	P58012	376 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	RELA	Q04206	551 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	ACAP2	Q15057	778 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	HKDC1	Q2TB90	917 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	COL28A1	Q2UY09	1125 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	TAF1B	Q53T94	588 aa	Predicted RBP	9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CDKL4	Q5MAI5	379 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	WASHC2D	Q5SRD0	308 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	FAM69B	Q5VUD6	431 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	FAM219B	Q5XKK7	198 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	FAM198B	Q6UWH4	519 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	SLCO4C1	Q6ZQN7	724 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	FRA10AC1	Q70Z53	315 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CCDC91	Q7Z6B0	441 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	C17orf64	Q86WR6	236 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	TDRP	Q86YL5	185 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	DSEL	Q8IZU8	1212 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	MREG	Q8N565	214 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	OR4K1	Q8NGD4	311 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	RHEBL1	Q8TAI7	183 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	STAG3L4	Q8TBR4	150 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	UBTD2	Q8WUN7	234 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	ATL1	Q8WXF7	558 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	GBP5	Q96PP8	586 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	MACROD1	Q9BQ69	325 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	SELENOS	Q9BQE4	189 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	DPH1	Q9BZG8	443 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	PCBD2	Q9H0N5	130 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CHST8	Q9H2A9	424 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	ACTR5	Q9H9F9	607 aa	Predicted RBP	9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	FANCE	Q9HB96	536 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	LHX9	Q9NQ69	397 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	TMEM184C	Q9NVA4	438 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	NUDT4	Q9NZJ9	180 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	CD274	Q9NZQ7	290 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	XPR1	Q9UBH6	696 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	SERTAD3	Q9UJW9	196 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	EMCN	Q9ULC0	261 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	SNX7	Q9UNH6	387 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	MRPS18B	Q9Y676	258 aa	Known RBP	9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	IKBKG	Q9Y6K9	419 aa		9.81	□□□□□ -0.84
MRPL55-223	ENST00000459783	SUPT3H	B4E1H0	165 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783		E7EQ34	232 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	MEN1	O00255	615 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	MAP2K7	O14733	419 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	RRP8	O43159	456 aa	Known RBP	9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	SUPT3H	O75486	399 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	WDR47	O94967	919 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	EZR	P15311	586 aa	Known RBP	9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	CCND1	P24385	295 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	HNMT	P50135	292 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	REEP5	Q00765	189 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	ABHD18	Q0P651	414 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	RASA2	Q15283	850 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	FAM83E	Q2M2I3	478 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	ZC3H12B	Q5HYM0	836 aa	Known RBP	9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	C1orf189	Q5VU69	101 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	SULT1C3	Q6IMI6	304 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	ADNP2	Q6IQ32	1131 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	RHBDD2	Q6NTF9	364 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	C16orf46	Q6P387	395 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	NXPE4	Q6UWF7	544 aa		9.8	□□□□□ -0.84
MRPL55-223	ENST00000459783	COX15	Q7KZN9	410 aa		9.8	□□□□□ -0.84

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms