RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 C3AR1Q16581 482 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 SYT16Q17RD7 645 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 XKRXQ6PP77 449 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 OTOAQ7RTW8 1153 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 GSDMBQ8TAX9 411 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 MMABQ96EY8 250 aaPredicted RBP14.57□□□□□ -0.08
CHMP3-202ENST00000393773 TUBB6Q9BUF5 446 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 TREX1Q9NSU2 369 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 CDC14AQ9UNH5 594 aa14.57□□□□□ -0.08
CHMP3-202ENST00000393773 A0A0A6YYC8 382 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-202ENST00000393773 ARHGEF33A8MVX0 844 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 I3L1I5 382 aaPredicted RBP14.56□□□□□ -0.08
CHMP3-202ENST00000393773 PTMAP06454 111 aaKnown RBP14.56□□□□□ -0.08
CHMP3-202ENST00000393773 ATP5DP30049 168 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 FDFT1P37268 417 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 NAP1L1P55209 391 aaKnown RBP14.56□□□□□ -0.08
CHMP3-202ENST00000393773 AP2B1P63010 937 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 ABHD17BQ5VST6 288 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 GARNL3Q5VVW2 1013 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 ZNF425Q6IV72 752 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 SUSD1Q6UWL2 747 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 LRRC6Q86X45 466 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 MPP5Q8N3R9 675 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 MDS2Q8NDY4 140 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 PPHLN1Q8NEY8 458 aaKnown RBP14.56□□□□□ -0.08
CHMP3-202ENST00000393773 SUN3Q8TAQ9 357 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 OR2A5Q96R48 311 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 YIPF2Q9BWQ6 316 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 DRC3Q9H069 523 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 MRPS30Q9NP92 439 aaKnown RBP14.56□□□□□ -0.08
CHMP3-202ENST00000393773 CHRAC1Q9NRG0 131 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 TSR3Q9UJK0 312 aaKnown RBP14.56□□□□□ -0.08
CHMP3-202ENST00000393773 ZNF835Q9Y2P0 537 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 HCFC1P51610 2035 aa14.56□□□□□ -0.08
CHMP3-202ENST00000393773 MYO1CO00159 1063 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 KPNA5O15131 536 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 LIASO43766 372 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 ANXA5P08758 320 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 C8orf89P0DMQ9 161 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 EZRP15311 586 aaKnown RBP14.55□□□□□ -0.08
CHMP3-202ENST00000393773 EIF3BP55884 814 aaKnown RBP14.55□□□□□ -0.08
CHMP3-202ENST00000393773 KRTAP10-9P60411 292 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 MAT1AQ00266 395 aaKnown RBP14.55□□□□□ -0.08
CHMP3-202ENST00000393773 ZNF766Q5HY98 468 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 LRRC8BQ6P9F7 803 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 Q6ZPB1 254 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-202ENST00000393773 LANCL3Q6ZV70 420 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 PRUNE1Q86TP1 453 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 SHISA5Q8N114 240 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 UBL4BQ8N7F7 174 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 MAGEC3Q8TD91 643 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 SMPDL3AQ92484 453 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 GPR137Q96N19 417 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 FOPNLQ96NB1 174 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 BIRC8Q96P09 236 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 VN1R1Q9GZP7 353 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 ANAPC5Q9UJX4 755 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 AMFRQ9UKV5 643 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 MKL2Q9ULH7 1088 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 PCDHGB6Q9Y5F9 930 aa14.55□□□□□ -0.08
CHMP3-202ENST00000393773 EPN1Q9Y6I3 576 aaPredicted RBP14.55□□□□□ -0.08
CHMP3-202ENST00000393773 IGHV3-20A0A0C4DH32 117 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 MIF4GDA9UHW6 222 aaKnown RBP14.54□□□□□ -0.08
CHMP3-202ENST00000393773 E7EVH7 732 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 HAT1O14929 419 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 NIPSNAP2O75323 286 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 SEC24DO94855 1032 aaPredicted RBP14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ICAM2P13598 275 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ARNTP27540 789 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 SSTR2P30874 369 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 RPA3P35244 121 aaPredicted RBP14.54□□□□□ -0.08
CHMP3-202ENST00000393773 KIR3DL1P43629 444 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 CASP6P55212 293 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 CRADDP78560 199 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 LONRF1Q17RB8 773 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ICE2Q659A1 982 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 RAD9BQ6WBX8 426 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 NCCRP1Q6ZVX7 275 aaPredicted RBP14.54□□□□□ -0.08
CHMP3-202ENST00000393773 PEX26Q7Z412 305 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 BEST3Q8N1M1 668 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ACBD4Q8NC06 268 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ACRBPQ8NEB7 543 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 OR9A1PQ8NGU1 263 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ADAMTS18Q8TE60 1221 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 THAP3Q8WTV1 239 aaPredicted RBP14.54□□□□□ -0.08
CHMP3-202ENST00000393773 LPGAT1Q92604 370 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 MAGED4Q96JG8 741 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 SIGLEC12Q96PQ1 595 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 NPAS2Q99743 824 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 HES7Q9BYE0 225 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 TSPY26PQ9H489 355 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 RAB6BQ9NRW1 208 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 STMN3Q9NZ72 180 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 TAC3Q9UHF0 121 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 PCYOX1Q9UHG3 505 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 TEKT2Q9UIF3 430 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ITGB1BP2Q9UKP3 347 aa14.54□□□□□ -0.08
CHMP3-202ENST00000393773 ASPDHA6ND91 283 aa14.53□□□□□ -0.08
CHMP3-202ENST00000393773 PSIP1O75475 530 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms