RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 SDR16C5Q8N3Y7 309 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 HUS1BQ8NHY5 278 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 KLHL29Q96CT2 875 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 CMTM7Q96FZ5 175 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 MTERF1Q99551 399 aaKnown RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 RRP15Q9Y3B9 282 aaKnown RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 IGKV1-8A0A0C4DH67 115 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 LOC100653049A0A140TA62 436 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 FAM221BA6H8Z2 402 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 YY2O15391 372 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 KRT34O76011 436 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 GNSP15586 552 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 CTSKP43235 329 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 DDX39BQ13838 428 aaKnown RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 AGKQ53H12 422 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 PAOXQ6QHF9 649 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 RINLQ6ZS11 566 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 GK5Q6ZS86 529 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 RBM12BQ8IXT5 1001 aaKnown RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 ZNF740Q8NDX6 193 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 OR2L3Q8NG85 312 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 OR9I1Q8NGQ6 314 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 AIF1LQ9BQI0 150 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 PITHD1Q9GZP4 211 aaPredicted RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 TMEM74BQ9NUR3 256 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 PILRBQ9UKJ0 227 aa22.98■■□□□ 1.27
SNX3-203ENST00000368979 POLR3HQ9Y535 204 aaPredicted RBP22.98■■□□□ 1.27
SNX3-203ENST00000368979 MAGEB17A8MXT2 336 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 FOXE1O00358 373 aaPredicted RBP22.97■■□□□ 1.27
SNX3-203ENST00000368979 SEC22BO75396 215 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 PIAS2O75928 621 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 CCNDBP1O95273 360 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 CXCR2P25025 360 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 CORO7P57737 925 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 CYLC2Q14093 348 aaPredicted RBP22.97■■□□□ 1.27
SNX3-203ENST00000368979 MAPRE2Q15555 327 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 IL23RQ5VWK5 629 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 TMIGD1Q6UXZ0 262 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 BMP8AQ7Z5Y6 402 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 FUNDC1Q8IVP5 155 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 FBXL6Q8N531 539 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 NT5DC2Q9H857 520 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 SLC6A20Q9NP91 592 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 MRPS30Q9NP92 439 aaKnown RBP22.97■■□□□ 1.27
SNX3-203ENST00000368979 CCDC167Q9P0B6 97 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 SUSD2Q9UGT4 822 aa22.97■■□□□ 1.27
SNX3-203ENST00000368979 LMO7DNF2Z398 122 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 H7BY64 318 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 PIK3CBP42338 1070 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 MNAT1P51948 309 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 CSNK1G2P78368 415 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 BNC1Q01954 994 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 HHEXQ03014 270 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 RPS6KA2Q15349 733 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 FLVCR1-AS1Q8TAF5 88 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 APIPQ96GX9 242 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 ZC3H10Q96K80 434 aaKnown RBP22.96■■□□□ 1.27
SNX3-203ENST00000368979 FCRL1Q96LA6 429 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 PRAP1Q96NZ9 151 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 DMRT3Q9NQL9 472 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 TAS2R1Q9NYW7 299 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 ZIM2Q9NZV7 527 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 VPS29Q9UBQ0 182 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 DOLKQ9UPQ8 538 aa22.96■■□□□ 1.27
SNX3-203ENST00000368979 EIF3LQ9Y262 564 aaKnown RBP22.96■■□□□ 1.27
SNX3-203ENST00000368979 ARHGEF17Q96PE2 2063 aaPredicted RBP22.95■■□□□ 1.26
SNX3-203ENST00000368979 PCM1Q15154 2024 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 ISM1B1AKI9 464 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 B2RBV5 119 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 NOBOXO60393 691 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 ETHE1O95571 254 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 G6PDP11413 515 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 ACPPP15309 386 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 AMD1P17707 334 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 CMPK1P30085 196 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 CNR2P34972 360 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 RPS13P62277 151 aaKnown RBP22.95■■□□□ 1.26
SNX3-203ENST00000368979 KIR2DS3Q14952 304 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 CHCHD2P9Q5T1J5 151 aaPredicted RBP22.95■■□□□ 1.26
SNX3-203ENST00000368979 PEAR1Q5VY43 1037 aaPredicted RBP22.95■■□□□ 1.26
SNX3-203ENST00000368979 CYP20A1Q6UW02 462 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 TMEM26Q6ZUK4 368 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 VN1R5Q7Z5H4 357 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 C17orf82Q86X59 251 aaPredicted RBP22.95■■□□□ 1.26
SNX3-203ENST00000368979 PARP9Q8IXQ6 854 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 KIF2BQ8N4N8 673 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 AVL9Q8NBF6 648 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 FBXO27Q8NI29 283 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 SLC22A18Q96BI1 424 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 METTL2AQ96IZ6 378 aaKnown RBP22.95■■□□□ 1.26
SNX3-203ENST00000368979 BTBD10Q9BSF8 475 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 RTKNQ9BST9 563 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 C1orf21Q9H246 121 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 RHBGQ9H310 441 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 TMEM45AQ9NWC5 275 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 PPT2Q9UMR5 302 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 TMED5Q9Y3A6 229 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 SNX11Q9Y5W9 270 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 SPAG17Q6Q759 2223 aa22.95■■□□□ 1.26
SNX3-203ENST00000368979 TDRD6O60522 2096 aaKnown RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms