RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 PIM2Q9P1W9 311 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RBPJLQ9UBG7 517 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 DRGXA6NNA5 263 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SHOXO15266 292 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 OR2B3O76000 313 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 INPP1P49441 399 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PTPN5P54829 565 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SLAMF1Q13291 335 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 GTDC1Q4AE62 458 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ZRANB3Q5FWF4 1079 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 MARCH8Q5T0T0 291 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 LRRC70Q7Z2Q7 622 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SAPCD2Q86UD0 394 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SLC51BQ86UW2 128 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 LSMEM1Q8N8F7 131 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 FAM181AQ8N9Y4 354 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SNAPC3Q92966 411 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PYCR2Q96C36 320 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 DIRAS2Q96HU8 199 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SAMD11Q96NU1 681 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CINPQ9BW66 212 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 OR51E2Q9H255 320 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 C14orf119Q9NWQ9 140 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF490Q9ULM2 529 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 GSTK1Q9Y2Q3 226 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ARHGAP33O14559 1287 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SLC43A1O75387 559 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CYP7B1O75881 506 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ADAP00813 363 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CCNYL3P0C7X3 344 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NR2F6P10588 404 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PEPDP12955 493 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ALAS2P22557 587 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PRKACBP22694 351 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FSHRP23945 695 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 RPL3P39023 403 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 AGTR2P50052 363 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 VLDLRP98155 873 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TIAL1Q01085 375 aaKnown RBP eCLIP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 BOP1Q14137 746 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MED22Q15528 200 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 EML3Q32P44 896 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CEP78Q5JTW2 689 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SLC35F1Q5T1Q4 408 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 DOK6Q6PKX4 331 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF782Q6ZMW2 699 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 BEND7Q8N7W2 519 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 OR5H6Q8NGV6 325 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SPPL2AQ8TCT8 520 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 RNF39Q9H2S5 420 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TPT1P8Q9HAU6 139 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 LATS2Q9NRM7 1088 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FAM240BA0A1B0GVZ2 78 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ARRDC5A6NEK1 342 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FABP12A6NFH5 140 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TFECO14948 347 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 BET1O15155 118 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 EGFRP00533 1210 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ITGB1P05556 798 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MAP2K3P46734 347 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SMIM11AP58511 58 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ACSM2AQ08AH3 577 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NXNL2Q5VZ03 156 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ACSM2BQ68CK6 577 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 IL31Q6EBC2 164 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FBXL22Q6P050 247 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FAM131AQ6UXB0 335 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 DDX53Q86TM3 631 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 LGI4Q8N135 537 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 EEF1AKMT1Q8WVE0 214 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ASB15Q8WXK1 588 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF419Q96HQ0 510 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 DMRTB1Q96MA1 342 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 UROC1Q96N76 676 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FEVQ99581 238 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ABHD16BQ9H3Z7 469 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PIGUQ9H490 435 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NSUN3Q9H649 340 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 TRIM45Q9H8W5 580 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 FOLH1BQ9HBA9 442 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 AMBNQ9NP70 447 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ABCG2Q9UNQ0 655 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 PTGESO14684 152 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CCNB2O95067 398 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 STSP08842 583 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 MAPK8P45983 427 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 HK3P52790 923 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NCF4Q15080 339 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF630Q2M218 657 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 GPR33Q49SQ1 333 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SETMARQ53H47 684 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 NOMO2Q5JPE7 1267 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 CCDC71Q8IV32 467 aaPredicted RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 RDH10Q8IZV5 341 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SIX5Q8N196 739 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 WDR36Q8NI36 951 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 SLC16A10Q8TF71 515 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 ZC3HAV1LQ96H79 300 aaKnown RBP4.63□□□□□ -1.67
PTPN13-201ENST00000316707 RADILQ96JH8 1075 aa4.63□□□□□ -1.67
PTPN13-201ENST00000316707 VPS35Q96QK1 796 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms