RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 ELAC1Q9H777 363 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 STXBP5LQ9Y2K9 1186 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 PSMD9O00233 223 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ECI2O75521 394 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 RNASEH2AO75792 299 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ITGB5P18084 799 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 CASRP41180 1078 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 SLC6A9P48067 706 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 DUSP4Q13115 394 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 SNAP47Q5SQN1 464 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 KIAA1614Q5VZ46 1190 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 CEP97Q8IW35 865 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 LRRN4Q8WUT4 740 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 UCK2Q9BZX2 261 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 OR2B2Q9GZK3 357 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 OAZ3Q9UMX2 235 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ROBO1Q9Y6N7 1651 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 PDLIM1O00151 329 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ANXA3P12429 323 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 TCEA1P23193 301 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ACTR1BP42025 376 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF565Q8N9K5 539 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 GAL3ST4Q96RP7 486 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 OR51V1Q9H2C8 321 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MAB21L2Q9Y586 359 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 SCN11AQ9UI33 1791 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 FXYD6-FXYD2A0A087WZ82 144 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 A0A1W2PQ45 241 aaPredicted RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 A0A1W2PQY0 241 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 STMND1H3BQB6 276 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 CHRNB2P17787 502 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 EDNRAP25101 427 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 POU4F2Q12837 409 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 PTGR1Q14914 329 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ZFAND2BQ8WV99 257 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 FCRL5Q96RD9 977 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 FXYD6Q9H0Q3 95 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ZBTB26Q9HCK0 441 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 NPIPA5E9PKD4 350 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 SLITRK5O94991 958 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 IL3P08700 152 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 HSD17B12Q53GQ0 312 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 CEP68Q76N32 757 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 TMBIM1Q969X1 311 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 WRAP53Q9BUR4 548 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 CHIAQ9BZP6 476 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 TREM1Q9NP99 234 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 NPIPA1Q9UND3 350 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 KIAA0100Q14667 2235 aaKnown RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 FAM159BA6NKW6 160 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 B4GALT5O43286 388 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 GLP1RP43220 463 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MEDAGQ5VYS4 303 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 TCEAL4Q96EI5 215 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MMP27Q9H306 513 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 FFAR2O15552 330 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MYCLP1P12525 358 aaPredicted RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 CXCR1P25024 350 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 DNAJB13P59910 316 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 MPP2Q14168 576 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 PSRC1Q6PGN9 363 aaPredicted RBP7.78□□□□□ -1.16
LIMD1-201ENST00000273317 ACTR6Q9GZN1 396 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 FBRSQ9HAH7 460 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 FKBPLQ9UIM3 349 aa7.78□□□□□ -1.16
LIMD1-201ENST00000273317 A0A1W2PRQ8 180 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 EPHX1P07099 455 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 ASPAP45381 313 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF33AQ06730 810 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 NCEH1Q6PIU2 408 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 CMTR2Q8IYT2 770 aaKnown RBP7.77□□□□□ -1.16
LIMD1-201ENST00000273317 MFSD2AQ8NA29 543 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 FBXO22Q8NEZ5 403 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 OSBPL2Q9H1P3 480 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 GLS2Q9UI32 602 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 MAFBQ9Y5Q3 323 aaPredicted RBP7.77□□□□□ -1.16
LIMD1-201ENST00000273317 NOTOA8MTQ0 251 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 FOSL1P15407 271 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 FUT2Q10981 343 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF404Q494X3 552 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 ACSBG2Q5FVE4 666 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 EEF1DP3Q658K8 133 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 CHCHD4Q8N4Q1 142 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 FANK1Q8TC84 345 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 ZNF431Q8TF32 576 aaPredicted RBP7.77□□□□□ -1.16
LIMD1-201ENST00000273317 MTERF1Q99551 399 aaKnown RBP7.77□□□□□ -1.16
LIMD1-201ENST00000273317 EBF2Q9HAK2 575 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 ZDHHC3Q9NYG2 299 aa7.77□□□□□ -1.16
LIMD1-201ENST00000273317 ZFP37Q9Y6Q3 630 aaPredicted RBP7.77□□□□□ -1.16
LIMD1-201ENST00000273317 SNRNP200O75643 2136 aaKnown RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 HOXD8P13378 290 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 ARL3P36405 182 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 UGT2B10P36537 528 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 PDE12Q6L8Q7 609 aaKnown RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 TNFAIP8L2Q6P589 184 aaPredicted RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 MARCH9Q86YJ5 346 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 IRF2BP1Q8IU81 584 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 DERL2Q9GZP9 239 aa7.77□□□□□ -1.17
LIMD1-201ENST00000273317 MRPS17Q9Y2R5 130 aaKnown RBP7.77□□□□□ -1.17
LIMD1-201ENST00000273317 SHROOM3Q8TF72 1996 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms