RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PERM1Q5SV97 790 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 SLX4IPQ5VYV7 408 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 MSANTD1Q6ZTZ1 278 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 GOLGA7Q7Z5G4 137 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 SNX20Q7Z614 316 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 ADCK1Q86TW2 530 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 ZBTB46Q86UZ6 589 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 TSPYL5Q86VY4 417 aaPredicted RBP19.95■□□□□ 0.78
SNX3-201ENST00000230085 TMEM25Q86YD3 366 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 FAM9CQ8IZT9 166 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 NDNFQ8TB73 568 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 UBTD2Q8WUN7 234 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 LINGO1Q96FE5 620 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 CPPED1Q9BRF8 314 aaPredicted RBP19.95■□□□□ 0.78
SNX3-201ENST00000230085 DSN1Q9H410 356 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 NDRG4Q9ULP0 352 aaKnown RBP19.95■□□□□ 0.78
SNX3-201ENST00000230085 IFT52Q9Y366 437 aa19.95■□□□□ 0.78
SNX3-201ENST00000230085 POLR3HQ9Y535 204 aaPredicted RBP19.95■□□□□ 0.78
SNX3-201ENST00000230085 TICRRQ7Z2Z1 1910 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 A0A096LPI6 279 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 C2orf81A6NN90 581 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 UPK1BO75841 260 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 LATS1O95835 1130 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 CR2P20023 1033 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 IGFBP5P24593 272 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 PTGER3P43115 390 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 MASP1P48740 699 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 GALNT3Q14435 633 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 DHCR24Q15392 516 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 NPTX1Q15818 432 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 LY6G5CQ5SRR4 150 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 IER5LQ5T953 404 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 RAP1GAP2Q684P5 730 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 SCIMPQ6UWF3 145 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 FAM217AQ8IXS0 508 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 BHMTQ93088 406 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 MYEOVQ96EZ4 313 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 APOL4Q9BPW4 351 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 P2RY12Q9H244 342 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 KCNH6Q9H252 994 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 TM9SF3Q9HD45 589 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 ACOT13Q9NPJ3 140 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 SPHK2Q9NRA0 654 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 C1orf109Q9NX04 203 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 SPO11Q9Y5K1 396 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 AP1M2Q9Y6Q5 423 aa19.94■□□□□ 0.78
SNX3-201ENST00000230085 GOLGA8CPA6NN73 597 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 NPIPB8E9PQR5 432 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 TSPAN3O60637 253 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 PGRP06401 933 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 LPOP22079 712 aaPredicted RBP19.93■□□□□ 0.78
SNX3-201ENST00000230085 CLCN7P51798 805 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 PIGFQ07326 219 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 ABHD18Q0P651 414 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 GTF2H2Q13888 395 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 MLIPQ5VWP3 458 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 GTF2H2CQ6P1K8 395 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 TTC23LQ6PF05 361 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 HS3ST5Q8IZT8 346 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 OR4F6Q8NGB9 312 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 OR4K2Q8NGD2 314 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 EEF1AKMT1Q8WVE0 214 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 HHIPQ96QV1 700 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 THUMPD3Q9BV44 507 aaKnown RBP19.93■□□□□ 0.78
SNX3-201ENST00000230085 MAGEH1Q9H213 219 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 IKZF5Q9H5V7 419 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 SLC2A4RGQ9NR83 387 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 KLHL3Q9UH77 587 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 DHRS7Q9Y394 339 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 PCDHB14Q9Y5E9 798 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 PCDHB1Q9Y5F3 818 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 RGS13O14921 159 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 RGS10O43665 173 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 NUAK1O60285 661 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 NFATC1O95644 943 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 PTTG1O95997 202 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 SEMG1P04279 462 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 CYP17A1P05093 508 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 ZNF24P17028 368 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 TGFBR2P37173 567 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 PAGE2BQ5JRK9 111 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 SBSNQ6UWP8 590 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 CPXM2Q8N436 756 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 FRS2Q8WU20 508 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 HPS1Q92902 700 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 TNKS2Q9H2K2 1166 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 LTB4R2Q9NPC1 389 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 ERVK-18Q9QC07 812 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 TRPS1Q9UHF7 1281 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 SAMD4AQ9UPU9 718 aaKnown RBP19.93■□□□□ 0.78
SNX3-201ENST00000230085 INVSQ9Y283 1065 aa19.93■□□□□ 0.78
SNX3-201ENST00000230085 OR2A25A4D2G3 310 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 PTGES3LE9PB15 166 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 AXIN1O15169 862 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 ACPPP15309 386 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 HOXD9P28356 352 aaPredicted RBP19.92■□□□□ 0.78
SNX3-201ENST00000230085 SERPINB1P30740 379 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 PXNP49023 591 aaPredicted RBP19.92■□□□□ 0.78
SNX3-201ENST00000230085 SGSHP51688 502 aa19.92■□□□□ 0.78
SNX3-201ENST00000230085 TEKQ02763 1124 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms