RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 RNF44Q7L0R7 432 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 ADCK2Q7Z695 626 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 PROKR1Q8TCW9 393 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 MCOLN3Q8TDD5 553 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 CDKL2Q92772 493 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 VPS39Q96JC1 886 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 DPH2Q9BQC3 489 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-228ENST00000618469 NDC1Q9BTX1 674 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 RHOJQ9H4E5 214 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 CCDC177Q9NQR7 707 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-228ENST00000618469 STOX2Q9P2F5 926 aaPredicted RBP15.32■□□□□ 0.04
BRCA1-228ENST00000618469 SNX7Q9UNH6 387 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 PDE10AQ9Y233 779 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 POLHQ9Y253 713 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 KLK4Q9Y5K2 254 aa15.32■□□□□ 0.04
BRCA1-228ENST00000618469 OR2A25A4D2G3 310 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 SLC16A5O15375 505 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 RAB40ALP0C0E4 278 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 ZNF37AP17032 561 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-228ENST00000618469 CCR10P46092 362 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 VSX2P58304 361 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-228ENST00000618469 GUCY2DQ02846 1103 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 TCTE1Q5JU00 501 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 FAM69BQ5VUD6 431 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 FRMPD2BQ6IN97 320 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 SYVN1Q86TM6 617 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 LRRC56Q8IYG6 542 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-228ENST00000618469 TTC29Q8NA56 475 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-228ENST00000618469 SEC14L1Q92503 715 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 GBP5Q96PP8 586 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 PSMG3-AS1Q96PY0 264 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 ZFYVE21Q9BQ24 234 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 NLNQ9BYT8 704 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 PARVBQ9HBI1 364 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 TXNDC16Q9P2K2 825 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 NDOR1Q9UHB4 597 aa15.31■□□□□ 0.04
BRCA1-228ENST00000618469 FARSAQ9Y285 508 aaKnown RBP15.31■□□□□ 0.04
BRCA1-228ENST00000618469 USP9YO00507 2555 aaPredicted RBP15.31■□□□□ 0.04
BRCA1-228ENST00000618469 IGKV1-8A0A0C4DH67 115 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CLEC18AA5D8T8 446 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CXorf49A8MYA2 514 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-228ENST00000618469 TUBB4AP04350 444 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CAPN1P07384 714 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CASRP41180 1078 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 MAGEA4P43358 317 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 TAS2R39P59534 338 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 GPX6P59796 221 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 PRDX1Q06830 199 aaKnown RBP15.3■□□□□ 0.04
BRCA1-228ENST00000618469 GRM7Q14831 915 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 PRAMEF13Q5VWM6 474 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CLEC18BQ6UXF7 455 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 TTLL10Q6ZVT0 673 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CTAGE3PQ8IX95 158 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 NOA1Q8NC60 698 aaKnown RBP15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CLEC18CQ8NCF0 446 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 MNS1Q8NEH6 495 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 USP9XQ93008 2570 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CCDC138Q96M89 665 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 PLCD4Q9BRC7 762 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 ATG10Q9H0Y0 220 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 ADNPQ9H2P0 1102 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 LRRC4CQ9HCJ2 640 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 CUEDC1Q9NWM3 386 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-228ENST00000618469 GPN3Q9UHW5 284 aaPredicted RBP15.3■□□□□ 0.04
BRCA1-228ENST00000618469 TCFL5Q9UL49 500 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 PADI2Q9Y2J8 665 aa15.3■□□□□ 0.04
BRCA1-228ENST00000618469 PCM1Q15154 2024 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 A0A1B0GX78 115 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 CTAGE15A4D2H0 777 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 NPEPPSL1A6NEC2 478 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 FAM159BA6NKW6 160 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 EIF2S1P05198 315 aaKnown RBP15.29■□□□□ 0.04
BRCA1-228ENST00000618469 GSTA2P09210 222 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 HIST1H2AGP0C0S8 130 aaPredicted RBP15.29■□□□□ 0.04
BRCA1-228ENST00000618469 CTAGE8P0CG41 777 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 HIST1H2ADP20671 130 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 ALAS2P22557 587 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 STX2P32856 288 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 GCGRP47871 477 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 ARSFP54793 590 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 SLC12A2P55011 1212 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 ABATP80404 500 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 DCDP81605 110 aaKnown RBP15.29■□□□□ 0.04
BRCA1-228ENST00000618469 UGT8Q16880 541 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 MLIPQ5VWP3 458 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 ZNF425Q6IV72 752 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 AGTRAPQ6RW13 159 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 TMEM207Q6UWW9 146 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 C3orf62Q6ZUJ4 267 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 CTAGE6Q86UF2 777 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 PAQR7Q86WK9 346 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 CTAGE4Q8IX94 777 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 MMGT1Q8N4V1 131 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 FAM26EQ8N5C1 309 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 KIF18AQ8NI77 898 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 APOBEC4Q8WW27 367 aaKnown RBP15.29■□□□□ 0.04
BRCA1-228ENST00000618469 ALKBH8Q96BT7 664 aaKnown RBP15.29■□□□□ 0.04
BRCA1-228ENST00000618469 HIST1H2AHQ96KK5 128 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 ZNF285Q96NJ3 590 aa15.29■□□□□ 0.04
BRCA1-228ENST00000618469 RBBP8Q99708 897 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms