RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 USP51Q70EK9 711 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 USP50Q70EL3 339 aaPredicted RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 SERPINA9Q86WD7 417 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 TIGD4Q8IY51 512 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 GOLM1Q8NBJ4 401 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 OR10G2Q8NGC3 310 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 GTF2H4Q92759 462 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 TINF2Q9BSI4 451 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 DNAJC27Q9NZQ0 273 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 ARID1BQ8NFD5 2236 aaPredicted RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 FABP12A6NFH5 140 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 SAP18O00422 153 aaKnown RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 MTX2O75431 263 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 ERN1O75460 977 aaKnown RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 HPRP00739 348 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 OGNP20774 298 aaKnown RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 FEN1P39748 380 aaKnown RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 ALDH9A1P49189 494 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 TTLL9Q3SXZ7 439 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 SPOUT1Q5T280 376 aaKnown RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 FAM171A1Q5VUB5 890 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 RNF219Q5W0B1 726 aaPredicted RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 LGI4Q8N135 537 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 RHEBL1Q8TAI7 183 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 SH3KBP1Q96B97 665 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 NACC2Q96BF6 587 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 ART5Q96L15 291 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 BOCQ9BWV1 1114 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 ZNF717Q9BY31 904 aaPredicted RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 ABHD16BQ9H3Z7 469 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 TRIM45Q9H8W5 580 aaPredicted RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 RANGRFQ9HD47 186 aaPredicted RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 THG1LQ9NWX6 298 aaKnown RBP11.46□□□□□ -0.57
CDH5-208ENST00000614547 ZNF222Q9UK12 451 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 TMCC3Q9ULS5 477 aa11.46□□□□□ -0.57
CDH5-208ENST00000614547 HTTP42858 3142 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 SLC35F4A4IF30 521 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 TTC34A8MYJ7 566 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 KCNK2O95069 426 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 CAPNS1P04632 268 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 TYMPP19971 482 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 DGKAP23743 735 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 ALDH6A1Q02252 535 aaKnown RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 MAD2L1BPQ15013 274 aaPredicted RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 TIMM50Q3ZCQ8 353 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 DDI2Q5TDH0 399 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 GDPD3Q7L5L3 318 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 PTRH1Q86Y79 214 aaKnown RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 ZNF548Q8NEK5 533 aaPredicted RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 EFHD2Q96C19 240 aaPredicted RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 FYTTD1Q96QD9 318 aaKnown RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 ASPNQ9BXN1 380 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 EMILIN2Q9BXX0 1053 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 MRM3Q9HC36 420 aaKnown RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 CLN6Q9NWW5 311 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 FCF1Q9Y324 198 aaKnown RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 COL11A2P13942 1736 aaPredicted RBP11.46□□□□□ -0.58
CDH5-208ENST00000614547 NINQ8N4C6 2090 aa11.46□□□□□ -0.58
CDH5-208ENST00000614547 MAGEB17A8MXT2 336 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 CXCL11O14625 94 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 TRBC1P01850 177 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 TACR1P25103 407 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 RPIAP49247 311 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 SLC11A2P49281 568 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 HK3P52790 923 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 VLDLRP98155 873 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 STARD3Q14849 445 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 ZNF181Q2M3W8 571 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 CASP12Q6UXS9 341 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 TRIM69Q86WT6 500 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 PAPD5Q8NDF8 572 aaKnown RBP11.45□□□□□ -0.58
CDH5-208ENST00000614547 CCSER2Q9H7U1 834 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 KCNH4Q9UQ05 1017 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 DLGAP4Q9Y2H0 992 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 TRAV19A0A0A6YYK7 116 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 BTN3A3O00478 584 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 OR10H3O60404 316 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 CLDN9O95484 217 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 RPS17P08708 135 aaKnown RBP11.45□□□□□ -0.58
CDH5-208ENST00000614547 CDKN2CP42773 168 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 TGM4P49221 684 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 GNG2P59768 71 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 PPP2R2BQ00005 443 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 ABRQ12979 859 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 C1DQ13901 141 aaKnown RBP11.45□□□□□ -0.58
CDH5-208ENST00000614547 POM121L1PQ3SYA9 428 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 DUSP28Q4G0W2 176 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 PRSS36Q5K4E3 855 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 AGAP6Q5VW22 663 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 GLB1LQ6UWU2 654 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 HMGN2P46Q86SG4 172 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 MON1AQ86VX9 555 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 KRT73Q86Y46 540 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 PGBD5Q8N414 524 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 TTC9BQ8N6N2 239 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 OR8J3Q8NGG0 315 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 DYNC2LI1Q8TCX1 351 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 AGAP4Q96P64 663 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 PTPN18Q99952 460 aa11.45□□□□□ -0.58
CDH5-208ENST00000614547 POLR2J2Q9GZM3 115 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms