RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 ZNF460Q14592 562 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ZRSR2Q15696 482 aaKnown RBP13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 CDCP2Q5VXM1 449 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ZCCHC23Q6ZST2 131 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 UBE2R2Q712K3 238 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ADAMTSL2Q86TH1 951 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 AMIGO1Q86WK6 493 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 OR4D9Q8NGE8 314 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 NCSTNQ92542 709 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ERP27Q96DN0 273 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ZDHHC12Q96GR4 267 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 RILPQ96NA2 401 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 RAB33BQ9H082 229 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 PFDN4Q9NQP4 134 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 ZNF358Q9NW07 568 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 OR6C2Q9NZP2 312 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 SPATA7Q9P0W8 599 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 LNPEPQ9UIQ6 1025 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 TRIM33Q9UPN9 1127 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 STK38LQ9Y2H1 464 aa13.04□□□□□ -0.32
CSNK1D-220ENST00000581737 OR5K3A6NET4 321 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 TRPC5OSA6NMA1 111 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ARHGEF33A8MVX0 844 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 GFYI3L273 518 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 KERAO60938 352 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 WISP3O95389 354 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 TSPAN12O95859 305 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 MT-CO3P00414 261 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ENO2P09104 434 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 CD1DP15813 335 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 PKLRP30613 574 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 BDKRB1P46663 353 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 GALNT1Q10472 559 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 TRA2AQ13595 282 aaKnown RBP eCLIP13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ARHGAP19Q14CB8 494 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ARHGAP40Q5TG30 622 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 CYHR1Q6ZMK1 362 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ACAD11Q709F0 780 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 USP53Q70EK8 1073 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 RASGRP3Q8IV61 690 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 OR4E2Q8NGC2 313 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 OR9A1PQ8NGU1 263 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 MCOLN3Q8TDD5 553 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 RSC1A1Q92681 617 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 GPR78Q96P69 363 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 CD180Q99467 661 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 NUDT22Q9BRQ3 303 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 GATA5Q9BWX5 397 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 SLC12A9Q9BXP2 914 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 STRADBQ9C0K7 418 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 PARVBQ9HBI1 364 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 HRASLS2Q9NWW9 162 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 AKAP7Q9P0M2 348 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 EPHA6Q9UF33 1036 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 RNF112Q9ULX5 631 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ICKQ9UPZ9 632 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ENTPD2Q9Y5L3 495 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 MN1Q10571 1320 aaPredicted RBP13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 BOD1L1Q8NFC6 3051 aa13.03□□□□□ -0.32
CSNK1D-220ENST00000581737 ANKRD12Q6UB98 2062 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 OR6C74A6NCV1 312 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 C2orf74A8MZ97 194 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 MYO1CO00159 1063 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 BTN3A1O00481 513 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 HIST1H2AGP0C0S8 130 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 GFAPP14136 432 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 ALOX15P16050 662 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 HIST1H2ADP20671 130 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 CCKBRP32239 447 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 CSF2RBP32927 897 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 AQP5P55064 265 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 INHBCP55103 352 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 AP1S2P56377 157 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 NKAIN2Q5VXU1 208 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 FAM91A1Q658Y4 838 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 ANKS6Q68DC2 871 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 TMEM71Q6P5X7 295 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 FRA10AC1Q70Z53 315 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 CARFQ8N187 725 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 CCNYL1Q8N7R7 359 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 OR6Y1Q8NGX8 325 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 RFWD2Q8NHY2 731 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 JPH3Q8WXH2 748 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 TTC9Q92623 222 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 KIAA1191Q96A73 305 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 SLC22A18Q96BI1 424 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 THOC1Q96FV9 657 aaKnown RBP13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 HIST1H2AHQ96KK5 128 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 RAB3IPQ96QF0 476 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 HIST1H2AJQ99878 128 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 H2AFJQ9BTM1 129 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 ALG9Q9H6U8 611 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 RDH14Q9HBH5 336 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 ABCF3Q9NUQ8 709 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 HEY2Q9UBP5 337 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 ATXN7L1Q9ULK2 861 aaPredicted RBP13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 SLC12A4Q9UP95 1085 aa13.02□□□□□ -0.33
CSNK1D-220ENST00000581737 PIPSLA2A3N6 862 aa13.01□□□□□ -0.33
CSNK1D-220ENST00000581737 GSAPA4D1B5 854 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms