RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 GOLGA6L10A6NI86 522 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 SLC16A8O95907 504 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 C8GP07360 202 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 GCGRP47871 477 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 CDKN2DP55273 166 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 RPS18P62269 152 aaKnown RBP12.53□□□□□ -0.4
SHMT2-211ENST00000554310 TIAL1Q01085 375 aaKnown RBP eCLIP12.53□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF844Q08AG5 666 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 ILF2Q12905 390 aaKnown RBP12.53□□□□□ -0.4
SHMT2-211ENST00000554310 KCNAB2Q13303 367 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 FASTKQ14296 549 aaKnown RBP12.53□□□□□ -0.4
SHMT2-211ENST00000554310 TUBB8Q3ZCM7 444 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 TCTE1Q5JU00 501 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 CEP85LQ5SZL2 805 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-211ENST00000554310 CYHR1Q6ZMK1 362 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 CEP128Q6ZU80 1094 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 UBE2R2Q712K3 238 aaPredicted RBP12.53□□□□□ -0.4
SHMT2-211ENST00000554310 RNF44Q7L0R7 432 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 SLC26A11Q86WA9 606 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 MCATQ8IVS2 390 aaKnown RBP12.53□□□□□ -0.4
SHMT2-211ENST00000554310 MYO1HQ8N1T3 1032 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 GPATCH11Q8N954 259 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF480Q8WV37 535 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 THAP4Q8WY91 577 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 ATP6V1G3Q96LB4 118 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF285Q96NJ3 590 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 SELENOSQ9BQE4 189 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 NSMCE4AQ9NXX6 385 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 MOCS1Q9NZB8 636 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 KCNMB2Q9Y691 235 aa12.53□□□□□ -0.4
SHMT2-211ENST00000554310 A0A1B0GX78 115 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 OR2A25A4D2G3 310 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 E7ENX8 843 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 SLC16A5O15375 505 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 SRPX2O60687 465 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 CTSVO60911 334 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 CAPN1P07384 714 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 CTSBP07858 339 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 MYZAPP0CAP1 466 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 FDXRP22570 491 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 ARSFP54793 590 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 ABATP80404 500 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 DCDP81605 110 aaKnown RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 TAP2Q03519 686 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 PDAP1Q13442 181 aaKnown RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 IL10RAQ13651 578 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 GRM7Q14831 915 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 HECTD2Q5U5R9 776 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 ICE2Q659A1 982 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 PAQR3Q6TCH7 311 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 SUSD1Q6UWL2 747 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 TRMT10CQ7L0Y3 403 aaKnown RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 ZNF771Q7L3S4 317 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 PALM2Q8IXS6 379 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 TTC29Q8NA56 475 aaPredicted RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 MCOLN3Q8TDD5 553 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 PYROXD1Q8WU10 500 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 EEF1AKMT1Q8WVE0 214 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 ZBTB9Q96C00 473 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 LINGO1Q96FE5 620 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 DPH7Q9BTV6 452 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 TMEM109Q9BVC6 243 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 ACAT2Q9BWD1 397 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 SLC25A18Q9H1K4 315 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 EPB41L4BQ9H329 900 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 SLC6A20Q9NP91 592 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 MRPS30Q9NP92 439 aaKnown RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 STARD5Q9NSY2 213 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 UTP6Q9NYH9 597 aaKnown RBP12.52□□□□□ -0.41
SHMT2-211ENST00000554310 TAC3Q9UHF0 121 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 TCFL5Q9UL49 500 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 MAN2B2Q9Y2E5 1009 aa12.52□□□□□ -0.41
SHMT2-211ENST00000554310 FITM1A5D6W6 292 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 B8ZZF3 427 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 RFPL1O75677 317 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 TSPAN12O95859 305 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 CD63P08962 238 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 FURINP09958 794 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 IMPA1P29218 277 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 IL2P60568 153 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 PRDX1Q06830 199 aaKnown RBP12.51□□□□□ -0.41
SHMT2-211ENST00000554310 TSTA3Q13630 321 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-211ENST00000554310 C1orf189Q5VU69 101 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 STRA8Q7Z7C7 330 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 ZC3HC1Q86WB0 502 aaKnown RBP12.51□□□□□ -0.41
SHMT2-211ENST00000554310 RELL1Q8IUW5 271 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 LRRC56Q8IYG6 542 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-211ENST00000554310 CDKL2Q92772 493 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 CCDC138Q96M89 665 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 ZFYVE21Q9BQ24 234 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 PARVBQ9HBI1 364 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 SAYSD1Q9NPB0 183 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 CCDC177Q9NQR7 707 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-211ENST00000554310 CUTCQ9NTM9 273 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 DHCR7Q9UBM7 475 aaKnown RBP12.51□□□□□ -0.41
SHMT2-211ENST00000554310 NDOR1Q9UHB4 597 aa12.51□□□□□ -0.41
SHMT2-211ENST00000554310 GPN3Q9UHW5 284 aaPredicted RBP12.51□□□□□ -0.41
SHMT2-211ENST00000554310 VWA7Q9Y334 891 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms