RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 PTPN3P26045 913 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 SLC9A3P48764 834 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 CYCSP99999 105 aaKnown RBP3.86□□□□□ -1.79
SNHG1-224ENST00000545688 DDX10Q13206 875 aaKnown RBP3.86□□□□□ -1.79
SNHG1-224ENST00000545688 KRT79Q5XKE5 535 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 OR6S1Q8NH40 331 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 RASL10AQ92737 203 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 KIFC3Q9BVG8 833 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 MAK16Q9BXY0 300 aaKnown RBP3.86□□□□□ -1.79
SNHG1-224ENST00000545688 GKN1Q9NS71 199 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 FAM207AQ9NSI2 230 aaPredicted RBP3.86□□□□□ -1.79
SNHG1-224ENST00000545688 STUB1Q9UNE7 303 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 MYOM2P54296 1465 aa3.86□□□□□ -1.79
SNHG1-224ENST00000545688 ADGRB3O60242 1522 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 DUOX2Q9NRD8 1548 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 TMEM221A6NGB7 291 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 CDK2AP2O75956 126 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 DARSP14868 501 aaKnown RBP3.85□□□□□ -1.79
SNHG1-224ENST00000545688 TRIM21P19474 475 aaKnown RBP3.85□□□□□ -1.79
SNHG1-224ENST00000545688 JAK1P23458 1154 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 PGFP49763 221 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 GUCY2DQ02846 1103 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 PAX8Q06710 450 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 LY6DQ14210 128 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 MOGAT2Q3SYC2 334 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 IGSF11Q5DX21 431 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 LYSMD4Q5XG99 296 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 RSRC2Q7L4I2 434 aaKnown RBP3.85□□□□□ -1.79
SNHG1-224ENST00000545688 MAATS1Q7Z4T9 603 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 KBTBD6Q86V97 674 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 TMEM173Q86WV6 379 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-224ENST00000545688 MAPK15Q8TD08 544 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 MIPOL1Q8TD10 442 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 GATAD1Q8WUU5 269 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 DHX58Q96C10 678 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 MIS12Q9H081 205 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 MMP27Q9H306 513 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 SYNCQ9H7C4 482 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 Q9N2K0 584 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 TEX10Q9NXF1 929 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-224ENST00000545688 PSD3Q9NYI0 1048 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 ZNF215Q9UL58 517 aaPredicted RBP3.85□□□□□ -1.79
SNHG1-224ENST00000545688 WBP11Q9Y2W2 641 aaKnown RBP3.85□□□□□ -1.79
SNHG1-224ENST00000545688 ERBINQ96RT1 1412 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 RIMS2Q9UQ26 1411 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 SLIT2O94813 1529 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 EHBP1L1Q8N3D4 1523 aa3.85□□□□□ -1.79
SNHG1-224ENST00000545688 A0A1W2PQ09 198 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 C2orf81A6NN90 581 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 AGAP14A8MT82 685 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 EPHB6O15197 1021 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 ADAMDEC1O15204 470 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 BCL10O95999 233 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 IGHV3-13P01766 116 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 VTNP04004 478 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 SMIM18P0DKX4 95 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 PTGER3P43115 390 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 LBX1P52954 281 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 CSNK2BP67870 215 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 CA9Q16790 459 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 DUSP28Q4G0W2 176 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 PLEKHS1Q5SXH7 462 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 RNASEH2BQ5TBB1 312 aaKnown RBP3.84□□□□□ -1.79
SNHG1-224ENST00000545688 LCN1P1Q5VSP4 162 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 TMEM211Q6ICI0 200 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 TMPRSS11BQ86T26 416 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 NUDT13Q86X67 352 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 AQP11Q8NBQ7 271 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 PTPMT1Q8WUK0 201 aaPredicted RBP3.84□□□□□ -1.79
SNHG1-224ENST00000545688 SSMEM1Q8WWF3 244 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 ARSGQ96EG1 525 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 FAM120BQ96EK7 910 aaKnown RBP3.84□□□□□ -1.79
SNHG1-224ENST00000545688 OSGEPL1Q9H4B0 414 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 PANK3Q9H999 370 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 PTRH2Q9Y3E5 179 aaKnown RBP3.84□□□□□ -1.79
SNHG1-224ENST00000545688 TRIM17Q9Y577 477 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 DISP2A7MBM2 1401 aa3.84□□□□□ -1.79
SNHG1-224ENST00000545688 CEP152O94986 1710 aa3.84□□□□□ -1.8
SNHG1-224ENST00000545688 ZNF646O15015 1829 aaPredicted RBP3.84□□□□□ -1.8
SNHG1-224ENST00000545688 OBSCNQ5VST9 7968 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 DOK2O60496 412 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 BAIAP3O94812 1187 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 SLC2A2P11168 524 aaPredicted RBP3.83□□□□□ -1.8
SNHG1-224ENST00000545688 NRIP1P48552 1158 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 TMEM50BP56557 158 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 MC1RQ01726 317 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 SYT14P1Q58G82 188 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 KIF6Q6ZMV9 814 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 G2E3Q7L622 706 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 SZRD1Q7Z422 152 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 CATSPERDQ86XM0 798 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 UNC5CLQ8IV45 518 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 NUP37Q8NFH4 326 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 APOBEC4Q8WW27 367 aaKnown RBP3.83□□□□□ -1.8
SNHG1-224ENST00000545688 FAM20AQ96MK3 541 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 MS4A10Q96PG2 267 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 CHCHD6Q9BRQ6 235 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 MED20Q9H944 212 aa3.83□□□□□ -1.8
SNHG1-224ENST00000545688 CSNK1G3Q9Y6M4 447 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms