RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 CDHR3Q6ZTQ4 885 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 LRRC70Q7Z2Q7 622 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CLEC14AQ86T13 490 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TMPRSS11BQ86T26 416 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TRABD2AQ86V40 505 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 MYLK4Q86YV6 388 aaPredicted RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 TMEM126BQ8IUX1 230 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 IQCKQ8N0W5 287 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 D2HGDHQ8N465 521 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TEX9Q8N6V9 391 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 ZNF655Q8N720 491 aaPredicted RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 PTGR2Q8N8N7 351 aaPredicted RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 TTC29Q8NA56 475 aaPredicted RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 OR56A3Q8NH54 315 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 MZB1Q8WU39 189 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 SLC5A11Q8WWX8 675 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 SREK1Q8WXA9 508 aaKnown RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 CLIP3Q96DZ5 547 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 RNF31Q96EP0 1072 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 APOPT1Q96IL0 206 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 SLC41A2Q96JW4 573 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 PRAP1Q96NZ9 151 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TEFMQ96QE5 360 aaKnown RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 SELENOSQ9BQE4 189 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 ZPBPQ9BS86 351 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TMEM79Q9BSE2 394 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TMEM109Q9BVC6 243 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 SGPP1Q9BX95 441 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 NLNQ9BYT8 704 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 PITPNM3Q9BZ71 974 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 ASPSCR1Q9BZE9 553 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CD244Q9BZW8 370 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CCDC86Q9H6F5 360 aaKnown RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 SLC6A20Q9NP91 592 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 FBXO8Q9NRD0 319 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 THSD1Q9NS62 852 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 FGF21Q9NSA1 209 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TMEM184CQ9NVA4 438 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 CUEDC1Q9NWM3 386 aaPredicted RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 SENP1Q9P0U3 644 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 ANKMY1Q9P2S6 941 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 NDOR1Q9UHB4 597 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 MID2Q9UJV3 735 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 PLCL2Q9UPR0 1127 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 BTRCQ9Y297 605 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 PCDHGA8Q9Y5G5 932 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 TNPO3Q9Y5L0 923 aaKnown RBP6.07□□□□□ -1.44
LTBR-212ENST00000543542 ADAMTS20P59510 1910 aa6.07□□□□□ -1.44
LTBR-212ENST00000543542 FEZF1A0PJY2 475 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PMS2P1A4D2B8 440 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 K7EPI3 171 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 HAT1O14929 419 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 TAPBPO15533 448 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 OR1F1O43749 312 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 KATNA1O75449 491 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 SCRG1O75711 98 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 OR2B3O76000 313 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 KIAA0754O94854 1291 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 SUPT7LO94864 414 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CCNYL3P0C7X3 344 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 EZRP15311 586 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 NPPBP16860 134 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 ATP5F1P24539 256 aaPredicted RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 CXCR2P25025 360 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 EEF1DP29692 281 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 SLC5A2P31639 672 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CRHR1P34998 444 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 SLC6A12P48065 614 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PIK3CGP48736 1102 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 AGTR2P50052 363 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CSRP3P50461 194 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CCNG1P51959 295 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 VSX2P58304 361 aaPredicted RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 RPS15AP62244 130 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 YBX1P67809 324 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 MEF2AQ02078 507 aaPredicted RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 IRF8Q02556 426 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 SLC18A2Q05940 514 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 ASPHQ12797 758 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CAMK2BQ13554 666 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 GTF2H2Q13888 395 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 IL11RAQ14626 422 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 RTP5Q14D33 572 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 SETDB1Q15047 1291 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 ZIC1Q15915 447 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 XKR6Q5GH73 641 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PAGE2BQ5JRK9 111 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 TCTE1Q5JU00 501 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CFAP157Q5JU67 520 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 CATSPEREQ5SY80 951 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 GTF2H2CQ6P1K8 395 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 NXPE4Q6UWF7 544 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 BPHLQ86WA6 291 aaPredicted RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 PAQR7Q86WK9 346 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 PLD3Q8IV08 490 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 SLC22A9Q8IVM8 553 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 MCATQ8IVS2 390 aaKnown RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 LRRC56Q8IYG6 542 aaPredicted RBP6.06□□□□□ -1.44
LTBR-212ENST00000543542 KRT78Q8N1N4 520 aa6.06□□□□□ -1.44
LTBR-212ENST00000543542 DNAJC22Q8N4W6 341 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms