RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ALKBH8Q96BT7 664 aaKnown RBP21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 PYCR2Q96C36 320 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 OR4K3Q96R72 315 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 DHRS4Q9BTZ2 278 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 PCMTD2Q9NV79 361 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 CROTQ9UKG9 612 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 SNX7Q9UNH6 387 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 ACOT9Q9Y305 439 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 IKBKGQ9Y6K9 419 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 AP1M2Q9Y6Q5 423 aa21.78■■□□□ 1.08
SFSWAP-204ENST00000535399 A0A0J9YVX5 310 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 EXOC1LA0A1B0GW35 172 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 ANXA5P08758 320 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 LTA4HP09960 611 aaKnown RBP21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 CCNYL3P0C7X3 344 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 NPPBP16860 134 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 F8A1P23610 371 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 GCAP28676 217 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 DEKP35659 375 aaKnown RBP21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 GCGRP47871 477 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 SERPINB8P50452 374 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 RELAQ04206 551 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 VAC14Q08AM6 782 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 SLC29A2Q14542 456 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 TGFBIQ15582 683 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 FRMPD2BQ6IN97 320 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 LCTLQ6UWM7 567 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 ZNF517Q6ZMY9 492 aaPredicted RBP21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 CCDC81Q6ZN84 652 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 FRA10AC1Q70Z53 315 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 TBC1D1Q86TI0 1168 aaPredicted RBP21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 GPSM1Q86YR5 675 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 DSELQ8IZU8 1212 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 CENPLQ8N0S6 344 aaPredicted RBP21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 SNRNP27Q8WVK2 155 aaKnown RBP21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 CLIP3Q96DZ5 547 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 ZFYVE21Q9BQ24 234 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 SELENOSQ9BQE4 189 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 SYNPO2LQ9H987 977 aa21.77■■□□□ 1.08
SFSWAP-204ENST00000535399 A0A087X1B8 175 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 A0A096LPK6 155 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 LOC105369274A0A096LPK9 316 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 LOC102723532A0A0G2JNH3 316 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 H7BY64 318 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 MEN1O00255 615 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 SRPX2O60687 465 aaPredicted RBP21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 MAGEA12P43365 314 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 KCNC1P48547 511 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 VSNL1P62760 191 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 CXADRP78310 365 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 IRF9Q00978 393 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 PTCHD3Q3KNS1 767 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 TAOK1Q7L7X3 1001 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 ISCA2Q86U28 154 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 C17orf64Q86WR6 236 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 OR4N4Q8N0Y3 316 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 CT55Q8WUE5 264 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 KCTD4Q8WVF5 259 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 KIAA1143Q96AT1 154 aaPredicted RBP21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 RHBDF1Q96CC6 855 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 NXNL1Q96CM4 212 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 PRAP1Q96NZ9 151 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 EGFL8Q99944 293 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 HAUS8Q9BT25 410 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 GPN2Q9H9Y4 310 aaPredicted RBP21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 NMRAL1Q9HBL8 299 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 TMEM184CQ9NVA4 438 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 IRAK4Q9NWZ3 460 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 IL17BQ9UHF5 180 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 TLK1Q9UKI8 766 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 PCDHGA4Q9Y5G9 962 aa21.76■■□□□ 1.07
SFSWAP-204ENST00000535399 ITPR1Q14643 2758 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 HAT1O14929 419 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 KRT37O76014 449 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 HBQ1P09105 142 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 EZRP15311 586 aaKnown RBP21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 TFEBP19484 476 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 HRH2P25021 359 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 CNTFP26441 200 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 TYK2P29597 1187 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 HNMTP50135 292 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 VSX2P58304 361 aaPredicted RBP21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 C18orf21Q32NC0 220 aaPredicted RBP21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 TCTE1Q5JU00 501 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 CDKL4Q5MAI5 379 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 ARHGAP40Q5TG30 622 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 ZNF385CQ66K41 422 aaPredicted RBP21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 LCN10Q6JVE6 187 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 RHBDD2Q6NTF9 364 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 FAM199XQ6PEV8 388 aaPredicted RBP21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 KLHDC8AQ8IYD2 350 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 OR2A5Q96R48 311 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 SLC7A5P2Q9GIP4 190 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 ALG9Q9H6U8 611 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 STARD5Q9NSY2 213 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 SRPK3Q9UPE1 567 aa21.75■■□□□ 1.07
SFSWAP-204ENST00000535399 FITM1A5D6W6 292 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 H0YGG7 62 aa21.74■■□□□ 1.07
SFSWAP-204ENST00000535399 KRT38O76015 456 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms