RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 PIGGQ5H8A4 983 aa14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 LGI4Q8N135 537 aa14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 IPCEF1Q8WWN9 437 aaPredicted RBP14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 DNASE1L2Q92874 299 aa14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 FUBP1Q96AE4 644 aaKnown RBP14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 VMP1Q96GC9 406 aa14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 ARNT2Q9HBZ2 717 aa14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 TAC3Q9UHF0 121 aa14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 SPO11Q9Y5K1 396 aa14.9□□□□□ -0.02
PCDHA3-202ENST00000532566 SAGP10523 405 aaPredicted RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 C4BPBP20851 252 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 FMO3P31513 532 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 CCDC157Q569K6 752 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 FAM129CQ86XR2 697 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 OR5AK3PQ8NH89 298 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 ZCCHC10Q8TBK6 192 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 TMEM27Q9HBJ8 222 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 AMBNQ9NP70 447 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 SPHK2Q9NRA0 654 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 MRPS7Q9Y2R9 242 aaKnown RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 HEBP2Q9Y5Z4 205 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 LOC110117498-PIK3R3F6TDL0 507 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 GSRP00390 522 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 PRSS56P0CW18 603 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 FSHRP23945 695 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 MYL9P24844 172 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 HTR1EP28566 365 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 KHKP50053 298 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 ARSFP54793 590 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF423Q2M1K9 1284 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 KLHL17Q6TDP4 642 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 POF1BQ8WVV4 589 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 RGMAQ96B86 450 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 TRIM8Q9BZR9 551 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 SRMSQ9H3Y6 488 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 ZDHHC4Q9NPG8 344 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 GALNT8Q9NY28 637 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 RPS13P62277 151 aaKnown RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 CDK6Q00534 326 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 LINC01465Q8N7H1 131 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF296Q8WUU4 475 aaPredicted RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 COL21A1Q96P44 957 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 MCCC1Q96RQ3 725 aaPredicted RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 POLR2J3Q9H1A7 115 aaKnown RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 OR51B5Q9H339 312 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 RPF2Q9H7B2 306 aaKnown RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 THUMPD1Q9NXG2 353 aaKnown RBP14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 SLCO3A1Q9UIG8 710 aa14.89□□□□□ -0.03
PCDHA3-202ENST00000532566 M0QX08 132 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 HAT1O14929 419 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 CASKO14936 926 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 DFNA5O60443 496 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 HLA-DQA2P01906 255 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 CHRM1P11229 460 aaPredicted RBP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 RAB33AQ14088 237 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 PYDC2Q56P42 97 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 C2orf27AQ580R0 203 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 NOXRED1Q6NXP6 359 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 FAM220AQ7Z4H9 259 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 POMGNT2Q8NAT1 580 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 GEMIN6Q8WXD5 167 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 STON2Q8WXE9 905 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 KHSRPQ92945 711 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 C11orf16Q9NQ32 467 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 TREX1Q9NSU2 369 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 CAPN14A8MX76 684 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 PENKP01210 267 aaPredicted RBP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 ALDH4A1P30038 563 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 LRRC32Q14392 662 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 MYBPC3Q14896 1274 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 COQ5Q5HYK3 327 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 EGFLAMQ63HQ2 1017 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 FLCNQ8NFG4 579 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 OR10Q1Q8NGQ4 319 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 OR9A1PQ8NGU1 263 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 PIGXQ8TBF5 258 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 SLC5A11Q8WWX8 675 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 FBXL20Q96IG2 436 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 OSBPL10Q9BXB5 764 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 KCNH6Q9H252 994 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 DNAAF2Q9NVR5 837 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 PCTPQ9UKL6 214 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 PRORSD1PA6NEY8 169 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 H3BNH8 94 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 EEDO75530 441 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 C8BP07358 591 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 ACTR1BP42025 376 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 ACTR1AP61163 376 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 ZNF805Q5CZA5 627 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 OGFOD2Q6N063 350 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 CXXC5Q7LFL8 322 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 TAF8Q7Z7C8 310 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 ZFAND4Q86XD8 727 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 GPR150Q8NGU9 434 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 GLYATL1Q969I3 302 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 UTP4Q969X6 686 aaKnown RBP14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 LOC100130705A0A1B0GUX0 176 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 PRMT3O60678 531 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 BCKDHAP12694 445 aa14.88□□□□□ -0.03
PCDHA3-202ENST00000532566 CSF2RAP15509 400 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms