RNA–Protein interactions for RNA: ENST00000495097.1

PTK2B-208, Transcript of protein tyrosine kinase 2 beta, human

TSL 3

Gene PTK2B, Length 270 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2B-208	ENST00000495097	PARP9	Q8IXQ6	854 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	MAGEC3	Q8TD91	643 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	RELT	Q969Z4	430 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	CNDP1	Q96KN2	507 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	NAP1L3	Q99457	506 aa	Predicted RBP	13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	SELENOS	Q9BQE4	189 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	ACAT2	Q9BWD1	397 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	LHPP	Q9H008	270 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	EPS8L2	Q9H6S3	715 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	HS3ST3B1	Q9Y662	390 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	MAD1L1	Q9Y6D9	718 aa		13.21	□□□□□ -0.29
PTK2B-208	ENST00000495097	SNRNP200	O75643	2136 aa	Known RBP	13.21	□□□□□ -0.3
PTK2B-208	ENST00000495097	PGRMC1	O00264	195 aa	Known RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	EIF2S1	P05198	315 aa	Known RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	PIM1	P11309	404 aa	Predicted RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	PKM	P14618	531 aa	Known RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	OGN	P20774	298 aa	Known RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	VSX2	P58304	361 aa	Predicted RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	ART3	Q13508	389 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	ANKRD20A4	Q4UJ75	823 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	ACSBG2	Q5FVE4	666 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	FAM180A	Q6UWF9	173 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	CENPU	Q71F23	418 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	CILP2	Q8IUL8	1156 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	RASGEF1C	Q8N431	466 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	METTL27	Q8N6F8	245 aa	Predicted RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	BCORP1	Q8N888	145 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	TTC29	Q8NA56	475 aa	Predicted RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	DENND1A	Q8TEH3	1009 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	ZDHHC19	Q8WVZ1	309 aa	Predicted RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	LMF1	Q96S06	567 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	SPSB2	Q99619	263 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	SLC26A1	Q9H2B4	701 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	XAB2	Q9HCS7	855 aa	Known RBP	13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	CUTC	Q9NTM9	273 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	ABCF3	Q9NUQ8	709 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097	OLAH	Q9NV23	265 aa		13.2	□□□□□ -0.3
PTK2B-208	ENST00000495097		A0A0J9YVX5	310 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	FAM237B	A0A1B0GVD1	139 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097		A0A1B0GX78	115 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	MAGEB16	A2A368	324 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	PRICKLE3	O43900	615 aa	Predicted RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	CTSV	O60911	334 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	JRK	O75564	520 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	MLN	P12872	115 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	MAGEA6	P43360	314 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097		Q0VFX4	171 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	CTBP1	Q13363	440 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	FASTK	Q14296	549 aa	Known RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	GRM7	Q14831	915 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	KLHL38	Q2WGJ6	581 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	TUBB8	Q3ZCM7	444 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	TCTE1	Q5JU00	501 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	ISLR2	Q6UXK2	745 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	SHISA6	Q6ZSJ9	500 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	SPNS2	Q8IVW8	549 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	DENND6A	Q8IWF6	608 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	SLC35F6	Q8N357	371 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	MCU	Q8NE86	351 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	CATSPER1	Q8NEC5	780 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	OR2L3	Q8NG85	312 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	OR11G2	Q8NGC1	345 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	ZUFSP	Q96AP4	578 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	THOC3	Q96J01	351 aa	Known RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	VPS50	Q96JG6	964 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	SERPINB12	Q96P63	405 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	CCDC68	Q9H2F9	335 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	C20orf96	Q9NUD7	363 aa	Predicted RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	INTS10	Q9NVR2	710 aa	Known RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	VPS9D1	Q9Y2B5	631 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	FAM169A	Q9Y6X4	670 aa		13.19	□□□□□ -0.3
PTK2B-208	ENST00000495097	CCDC168	Q8NDH2	2452 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	PKDREJ	Q9NTG1	2253 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	GOLGA6L10	A0A0M3HER8	536 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	ARHGEF33	A8MVX0	844 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	TARM1	B6A8C7	271 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	DSCR3	O14972	297 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	KIF5C	O60282	957 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	NRP2	O60462	931 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	USP1	O94782	785 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	KLHL18	O94889	574 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	MATN4	O95460	622 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	SYF2	O95926	243 aa	Known RBP	13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	CAT	P04040	527 aa	Known RBP	13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	ATP5D	P30049	168 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	CMPK1	P30085	196 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	RPA3	P35244	121 aa	Predicted RBP	13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	OR1D4	P47884	311 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	YBX1	P67809	324 aa	Known RBP	13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	MFAP5	Q13361	173 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	CUL1	Q13616	776 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	PPP1R7	Q15435	360 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	EEF1AKMT2	Q5JPI9	291 aa	Known RBP	13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	WASHC2D	Q5SRD0	308 aa		13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.18	□□□□□ -0.3
PTK2B-208	ENST00000495097	FRMPD2B	Q6IN97	320 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 52 ms