RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 H0YGG7 62 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 H7BY64 318 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 MED26O95402 600 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 ONECUT2O95948 504 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 HIST1H2AGP0C0S8 130 aaPredicted RBP13.75□□□□□ -0.21
SCAP-213ENST00000494938 NPPBP16860 134 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 HIST1H2ADP20671 130 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 STX2P32856 288 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 VSX2P58304 361 aaPredicted RBP13.75□□□□□ -0.21
SCAP-213ENST00000494938 ARF3P61204 181 aaPredicted RBP13.75□□□□□ -0.21
SCAP-213ENST00000494938 DCDP81605 110 aaKnown RBP13.75□□□□□ -0.21
SCAP-213ENST00000494938 RELAQ04206 551 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 LY6DQ14210 128 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 USP10Q14694 798 aaKnown RBP13.75□□□□□ -0.21
SCAP-213ENST00000494938 EFTUD2Q15029 972 aaKnown RBP eCLIP13.75□□□□□ -0.21
SCAP-213ENST00000494938 DEFB109BQ30KR1 87 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 TCTE1Q5JU00 501 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 SPATA6LQ8N4H0 392 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 ENDOVQ8N8Q3 282 aaKnown RBP13.75□□□□□ -0.21
SCAP-213ENST00000494938 OR56A3Q8NH54 315 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 PROKR1Q8TCW9 393 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 FBXL8Q96CD0 374 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 HIST1H2AHQ96KK5 128 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 PRAP1Q96NZ9 151 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 CATSPER2Q96P56 530 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 OR2A5Q96R48 311 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 HIST1H2AJQ99878 128 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 H2AFJQ9BTM1 129 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 FAM117AQ9C073 453 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 SLC7A5P2Q9GIP4 190 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 GPAMQ9HCL2 828 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 CUEDC1Q9NWM3 386 aaPredicted RBP13.75□□□□□ -0.21
SCAP-213ENST00000494938 ARL15Q9NXU5 204 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 NINJ2Q9NZG7 142 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 SH2B3Q9UQQ2 575 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 CACNA1GO43497 2377 aa13.75□□□□□ -0.21
SCAP-213ENST00000494938 KLF7O75840 302 aaPredicted RBP13.74□□□□□ -0.21
SCAP-213ENST00000494938 CCNDBP1O95273 360 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 PRB1P04280 392 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 ENO2P09104 434 aaPredicted RBP13.74□□□□□ -0.21
SCAP-213ENST00000494938 AGXTP21549 392 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 ALAS2P22557 587 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 SPRP35270 261 aaPredicted RBP13.74□□□□□ -0.21
SCAP-213ENST00000494938 ARSFP54793 590 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 AP1S2P56377 157 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 TBPL1P62380 186 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 GRM7Q14831 915 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 NAA25Q14CX7 972 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 ZKSCAN8Q15776 578 aaPredicted RBP13.74□□□□□ -0.21
SCAP-213ENST00000494938 PRTGQ2VWP7 1150 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 NKAIN1Q4KMZ8 207 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 THEMIS2Q5TEJ8 643 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 BORAQ6PGQ7 559 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 TTLL10Q6ZVT0 673 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 LRRN4CLQ8ND94 238 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 OR4K3Q96R72 315 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 ZFYVE21Q9BQ24 234 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 NDC1Q9BTX1 674 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 FUT8Q9BYC5 575 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 TRIM54Q9BYV2 358 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 PCBD2Q9H0N5 130 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 CCDC177Q9NQR7 707 aaPredicted RBP13.74□□□□□ -0.21
SCAP-213ENST00000494938 CUTCQ9NTM9 273 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 TMEM184CQ9NVA4 438 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 IRAK4Q9NWZ3 460 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 TXNDC16Q9P2K2 825 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 MTRF1LQ9UGC7 380 aaKnown RBP13.74□□□□□ -0.21
SCAP-213ENST00000494938 TCFL5Q9UL49 500 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 SRPK3Q9UPE1 567 aa13.74□□□□□ -0.21
SCAP-213ENST00000494938 ATRXP46100 2492 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 BOD1L1Q8NFC6 3051 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 HYKKA2RU49 373 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 HMX2A2RU54 273 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 CDC14CA4D256 554 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 NPEPPSL1A6NEC2 478 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 HAT1O14929 419 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 PHGDHO43175 533 aaKnown RBP13.73□□□□□ -0.21
SCAP-213ENST00000494938 CNOT3O75175 753 aaKnown RBP13.73□□□□□ -0.21
SCAP-213ENST00000494938 C1QL1O75973 258 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 GUCA1CO95843 209 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 FAM87AP0C7U9 286 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 GMPRP36959 345 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 SLC12A2P55011 1212 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 NAB1Q13506 487 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 IL10RAQ13651 578 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 NCF4Q15080 339 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 TSNQ15631 228 aaKnown RBP13.73□□□□□ -0.21
SCAP-213ENST00000494938 UGT8Q16880 541 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 FAM214AQ32MH5 1076 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 YOD1Q5VVQ6 348 aaPredicted RBP13.73□□□□□ -0.21
SCAP-213ENST00000494938 PRAMEF13Q5VWM6 474 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 MLIPQ5VWP3 458 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 MRPL14Q6P1L8 145 aaKnown RBP13.73□□□□□ -0.21
SCAP-213ENST00000494938 PLD3Q8IV08 490 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 TMEM151BQ8IW70 566 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 ARHGEF39Q8N4T4 335 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 DTWD1Q8N5C7 304 aa13.73□□□□□ -0.21
SCAP-213ENST00000494938 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.73□□□□□ -0.21
SCAP-213ENST00000494938 ALKBH8Q96BT7 664 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms